RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 HNRNPA3P51991 378 aaKnown RBP10.1□□□□□ -0.79
PTCH1-203ENST00000375274 RHOBP62745 196 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 LYG1Q8N1E2 194 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 ADAMTS17Q8TE56 1095 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 WNT2BQ93097 391 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 ATP23Q9Y6H3 246 aa10.1□□□□□ -0.79
PTCH1-203ENST00000375274 IGKV1D-42A0A075B6H8 117 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 PRRG2O14669 202 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 PLPPR5Q32ZL2 321 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 KHDC3LQ587J8 217 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 ZNF880Q6PDB4 577 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 KCNK17Q96T54 332 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 OR2H1Q9GZK4 316 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 HES4Q9HCC6 221 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 WNT16Q9UBV4 365 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 SLC45A2Q9UMX9 530 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 A0A0U1RQV5 110 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 SPRY3O43610 288 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 FCGR3AP08637 254 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 ZP1P60852 638 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 SSPNQ14714 243 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 ALKBH6Q3KRA9 238 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 SSX7Q7RTT5 188 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 ZNRF4Q8WWF5 429 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 AQP3Q92482 292 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 IL22RA2Q969J5 263 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 TMEM38BQ9NVV0 291 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 ZMAT5Q9UDW3 170 aaKnown RBP10.09□□□□□ -0.79
PTCH1-203ENST00000375274 OR2W1Q9Y3N9 320 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 SCN4AP35499 1836 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 UBE2V2Q15819 145 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 ACSM6Q6P461 480 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 FBXO17Q96EF6 278 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 WBP1LQ9NX94 342 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 PAX5Q02548 391 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 MYPOPQ86VE0 399 aaPredicted RBP10.09□□□□□ -0.79
PTCH1-203ENST00000375274 LDLRAD3Q86YD5 345 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 TMEM252Q8N6L7 170 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 VPS25Q9BRG1 176 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 MANBALQ9NQG1 85 aa10.09□□□□□ -0.79
PTCH1-203ENST00000375274 C11orf94C9JXX5 98 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 BCL3P20749 454 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 GNG4P50150 75 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 TMEM50BP56557 158 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 TEX30Q5JUR7 227 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 FAM27BQ5VT28 67 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 NSUN5P2Q63ZY6 315 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 OR2I1PQ8NGU4 316 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 DTD1Q8TEA8 209 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 ABHD3Q8WU67 409 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 AQP10Q96PS8 301 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 TRIOBPQ9H2D6 2365 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 A0A1B0GU03 582 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 DNPH1O43598 174 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 DEDDO75618 318 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 LYZL6O75951 148 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 FBP1P09467 338 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 RUNX1Q01196 453 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 TMEM183BQ1AE95 376 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 WFDC8Q8IUA0 241 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 M1APQ8TC57 530 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 OR10C1Q96KK4 312 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 ARRDC1-AS1Q9H2J1 176 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 CDIPTO14735 213 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 PTBP3O95758 552 aaKnown RBP10.08□□□□□ -0.8
PTCH1-203ENST00000375274 AMTP48728 403 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 STUMQ69YW2 141 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 FDX2Q6P4F2 183 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 SLC22A18ASQ8N1D0 253 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 CBY1Q9Y3M2 126 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 TRAV39A0A0B4J263 110 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 ST8SIA5O15466 376 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 HOXD4P09016 255 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-203ENST00000375274 CCL4P13236 92 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 MEOX1P50221 254 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 SPINK14Q6IE38 97 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 TRAT1Q6PIZ9 186 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 CYB561D1Q8N8Q1 229 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 OR5A2Q8NGI9 324 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 NOL4LQ96MY1 436 aaPredicted RBP10.08□□□□□ -0.8
PTCH1-203ENST00000375274 GPR35Q9HC97 309 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 PITPNC1Q9UKF7 332 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 SPTBN2O15020 2390 aa10.08□□□□□ -0.8
PTCH1-203ENST00000375274 RPL36A-HNRNPH2H7BZ11 118 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 CRISP2P16562 243 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 ANKRD55Q3KP44 614 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 TMEM255AQ5JRV8 349 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 SLC35E3Q7Z769 313 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 TUSC5Q8IXB3 177 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 ANAPC16Q96DE5 110 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 TMEM56Q96MV1 263 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 AKAP6Q13023 2319 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 J3QT63 122 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 IGHV3-13P01766 116 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 IGHV3-7P01780 117 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 GYPAP02724 150 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 LIFP15018 202 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 NR2C2APQ86WQ0 139 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 OR10G8Q8NGN5 311 aa10.07□□□□□ -0.8
PTCH1-203ENST00000375274 LRRC29Q8WV35 223 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms