RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 BET1O15155 118 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 GPR137BO60478 399 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 TNFSF13O75888 250 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 SPDEFO95238 335 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 PLATP00750 562 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 CRYAAP02489 173 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 ADH4P08319 380 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 GZMHP20718 246 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 CA6P23280 308 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 RPL12P30050 165 aaKnown RBP7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 GNRHRP30968 328 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 CEACAM8P31997 349 aaPredicted RBP7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 GLRXP35754 106 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 NPBWR2P48146 333 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 LUMP51884 338 aaPredicted RBP7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 TAS2R30P59541 319 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 PSG7Q13046 419 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 C1orf185Q5T7R7 199 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 C9orf135Q5VTT2 229 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 GGNBP1Q5YKI7 109 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 OR2T2Q6IF00 324 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 Q6P435 159 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 FAM180AQ6UWF9 173 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 VASH2Q86V25 355 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 ZNF695Q8IW36 515 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 CNEP1R1Q8N9A8 125 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 WDR31Q8NA23 367 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 SCCPDHQ8NBX0 429 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 SLC25A40Q8TBP6 338 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 MRPL30Q8TCC3 161 aaKnown RBP7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 TOMM40LQ969M1 308 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 ARL11Q969Q4 196 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 MARC2Q969Z3 335 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 STARD4Q96DR4 205 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 LURAP1Q96LR2 239 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 TAAR6Q96RI8 345 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 OR2J1Q9GZK6 312 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 HIPK2Q9H2X6 1198 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 TMEM165Q9HC07 324 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 LIN7CQ9NUP9 197 aaKnown RBP7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 COA4Q9NYJ1 87 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 DLL3Q9NYJ7 618 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 UBE2J1Q9Y385 318 aaPredicted RBP7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 VCANP13611 3396 aa7.42□□□□□ -1.22
SNRNP40-202ENST00000373720 IGKV1D-8A0A087WSZ0 117 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 TMEM30CPA0ZSE6 113 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 ZNF503-AS2A6NEH8 195 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 OOEPA6NGQ2 149 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 UMAD1C9J7I0 102 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 PRRG2O14669 202 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 ITGB1BP1O14713 200 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 PHF1O43189 567 aaPredicted RBP7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 HSPA12AO43301 675 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 SOX15O60248 233 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 NXPH2O95156 264 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 IGHV3-13P01766 116 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 HOXB5P09067 269 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 OR5AC1P0C628 307 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 ZNF44P15621 663 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 ZNF250P15622 560 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 AADACP22760 399 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 F2RP25116 425 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 IDH3GP51553 393 aaPredicted RBP7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 RAB32Q13637 225 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 HMGN3Q15651 99 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 LRRC37A5PQ49AS3 106 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 MIDNQ504T8 468 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 TOR2AQ5JU69 321 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 ATP1A1-AS1Q5TC04 95 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 ALKAL2Q6UX46 152 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 MRGPRGQ86SM5 289 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 H1FOOQ8IZA3 346 aaPredicted RBP7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 PRSS33Q8NF86 280 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 OR1S1Q8NH92 325 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 FAM57AQ8TBR7 257 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 CD300LFQ8TDQ1 290 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 GALMQ96C23 342 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 OR10C1Q96KK4 312 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 RAB40CQ96S21 281 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 COL25A1Q9BXS0 654 aaPredicted RBP7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 SLC5A7Q9GZV3 580 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 ARV1Q9H2C2 271 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 NGBQ9NPG2 151 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 ZC4H2Q9NQZ6 224 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 GSKIPQ9P0R6 139 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 RNF150Q9ULK6 438 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 STRAPQ9Y3F4 350 aaKnown RBP7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 SLC25A15Q9Y619 301 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 ZNF318Q5VUA4 2279 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 A0A0C4DFX4 3053 aa7.41□□□□□ -1.22
SNRNP40-202ENST00000373720 OTOGLQ3ZCN5 2332 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 CACNA1GO43497 2377 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 GPR179Q6PRD1 2367 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 TRAV24A0A0B4J272 114 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 BTBD17A6NE02 478 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 CCSO14618 274 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 ADAP1O75689 374 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 MBPP02686 304 aaPredicted RBP7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 HEXAP06865 529 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 SERPINE2P07093 398 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms