RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 ZNRD1Q9P1U0 126 aa12.36□□□□□ -0.43
RPF1-202ENST00000370656 RBMX2Q9Y388 322 aaKnown RBP12.36□□□□□ -0.43
RPF1-202ENST00000370656 FOXI3A8MTJ6 420 aaPredicted RBP12.35□□□□□ -0.43
RPF1-202ENST00000370656 GABARAPH6UMI1 98 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 AKR7A2O43488 359 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 ZNF780AO75290 641 aaPredicted RBP12.35□□□□□ -0.43
RPF1-202ENST00000370656 GYPAP02724 150 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 OCMP0CE72 109 aaPredicted RBP12.35□□□□□ -0.43
RPF1-202ENST00000370656 MPZP25189 248 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 TAS2R20P59543 309 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 SCN1BQ07699 218 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 ASAH1Q13510 395 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 GPR176Q14439 515 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 OXA1LQ15070 435 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 RGS21Q2M5E4 152 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 SAMD5Q5TGI4 173 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 C11orf88Q6PI97 169 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 OR8H2Q8N162 312 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 TNFAIP8L1Q8WVP5 186 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 ST8SIA4Q92187 359 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 MRPS24Q96EL2 167 aaKnown RBP12.35□□□□□ -0.43
RPF1-202ENST00000370656 DMRTB1Q96MA1 342 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 PAPOLGQ9BWT3 736 aaKnown RBP12.35□□□□□ -0.43
RPF1-202ENST00000370656 CST11Q9H112 138 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 KCNK15Q9H427 330 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 C14orf119Q9NWQ9 140 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 ONECUT1Q9UBC0 465 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 RPUSD1Q9UJJ7 312 aaKnown RBP12.35□□□□□ -0.43
RPF1-202ENST00000370656 TBC1D24Q9ULP9 559 aa12.35□□□□□ -0.43
RPF1-202ENST00000370656 A0A1W2PQ09 198 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 A6NLC8 198 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 SULT1C2O00338 296 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 PTBP3O95758 552 aaKnown RBP12.34□□□□□ -0.43
RPF1-202ENST00000370656 ACAA1P09110 424 aaPredicted RBP12.34□□□□□ -0.43
RPF1-202ENST00000370656 RPS27AP62979 156 aaKnown RBP12.34□□□□□ -0.43
RPF1-202ENST00000370656 GNG3P63215 75 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 TMEM69Q5SWH9 247 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 ELP2Q6IA86 826 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 SLC35E4Q6ICL7 350 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 OR10K2Q6IF99 312 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 Q6ZNX1 250 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 TMEM104Q8NE00 496 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 MRAPQ8TCY5 172 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 FAM46BQ96A09 425 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 THAP7Q9BT49 309 aaPredicted RBP12.34□□□□□ -0.43
RPF1-202ENST00000370656 PKIBQ9C010 78 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 METTL9Q9H1A3 318 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 AUNIPQ9H7T9 357 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 RHOFQ9HBH0 211 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.34□□□□□ -0.43
RPF1-202ENST00000370656 PCDHB16Q9NRJ7 776 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 C1orf123Q9NWV4 160 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 KAAG1Q9UBP8 84 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 NOTCH3Q9UM47 2321 aa12.34□□□□□ -0.43
RPF1-202ENST00000370656 KMT2CQ8NEZ4 4911 aaKnown RBP12.33□□□□□ -0.44
RPF1-202ENST00000370656 A0A0A6YYD4 124 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.33□□□□□ -0.44
RPF1-202ENST00000370656 FAM230AA0A1W2PPH8 454 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 hCG_1807616A0A1W2PRN6 198 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 RNASEK-C17orf49H0YIS7 233 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 GPR37O15354 613 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 PLA2G10O15496 165 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 KDM4BO94953 1096 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 PRB2P02812 416 aaPredicted RBP12.33□□□□□ -0.44
RPF1-202ENST00000370656 GRPP07492 148 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 LOXL3P58215 753 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 DEFA1P59665 94 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 DEFA3P59666 94 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 HOXA4Q00056 320 aaPredicted RBP12.33□□□□□ -0.44
RPF1-202ENST00000370656 SSBP1Q04837 148 aaKnown RBP12.33□□□□□ -0.44
RPF1-202ENST00000370656 DMRTC1Q5HYR2 192 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 NHLRC3Q5JS37 347 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 FAM90A1Q86YD7 464 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 CALHM1Q8IU99 346 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 DEDD2Q8WXF8 326 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 AQP3Q92482 292 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 RFT1Q96AA3 541 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 HIST1H2AAQ96QV6 131 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 URM1Q9BTM9 101 aaKnown RBP12.33□□□□□ -0.44
RPF1-202ENST00000370656 TMEM59Q9BXS4 323 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 ATG5Q9H1Y0 275 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 PPA2Q9H2U2 334 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 OR51I2Q9H344 312 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 ING4Q9UNL4 249 aa12.33□□□□□ -0.44
RPF1-202ENST00000370656 TRAV18A0A075B6X5 111 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 IGKV1-12A0A0C4DH73 117 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 ZNF732B4DXR9 585 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 NPFFO15130 113 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 LANCL1O43813 399 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 CA11O75493 328 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 PTTG1O95997 202 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 IGKV1D-12P01611 117 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 TMEM225BP0DP42 221 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 TMEM50BP56557 158 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 DGCR2P98153 550 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 MICBQ29980 383 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 ZNF260Q3ZCT1 412 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 TEX36Q5VZQ5 186 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 SLC36A1Q7Z2H8 476 aa12.32□□□□□ -0.44
RPF1-202ENST00000370656 ZNF573Q86YE8 665 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms