RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 RAG2P55895 527 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 ERVS71-1P61550 626 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 RPS23P62266 143 aaKnown RBP7.39□□□□□ -1.23
TPM3-213ENST00000368545 FAM27E3Q08E93 113 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 CXorf66Q5JRM2 361 aaPredicted RBP7.39□□□□□ -1.23
TPM3-213ENST00000368545 RSBN1Q5VWQ0 802 aaPredicted RBP7.39□□□□□ -1.23
TPM3-213ENST00000368545 ELP2Q6IA86 826 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 NCCRP1Q6ZVX7 275 aaPredicted RBP7.39□□□□□ -1.23
TPM3-213ENST00000368545 SLC25A26Q70HW3 274 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 TRAPPC6BQ86SZ2 158 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 CALHM1Q8IU99 346 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 TMEM229BQ8NBD8 167 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 GIMAP1Q8WWP7 306 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 UPRTQ96BW1 309 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 ADAT1Q9BUB4 502 aaKnown RBP7.39□□□□□ -1.23
TPM3-213ENST00000368545 CACNG6Q9BXT2 260 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 MMP28Q9H239 520 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 TMEM165Q9HC07 324 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 IFT46Q9NQC8 304 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 PURGQ9UJV8 347 aaKnown RBP7.39□□□□□ -1.23
TPM3-213ENST00000368545 SPG11Q96JI7 2443 aa7.39□□□□□ -1.23
TPM3-213ENST00000368545 IGKV1-12A0A0C4DH73 117 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 TMEM210A6NLX4 147 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 C19orf84I3L1E1 186 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 IGKV1D-12P01611 117 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 TCRBP04435 133 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 CA6P23280 308 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 MPZP25189 248 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 GIFP27352 417 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 BLVRBP30043 206 aaPredicted RBP7.38□□□□□ -1.23
TPM3-213ENST00000368545 MC5RP33032 325 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 RBM11P57052 281 aaKnown RBP7.38□□□□□ -1.23
TPM3-213ENST00000368545 BTG1P62324 171 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 IL24Q13007 206 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 PSG7Q13046 419 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 NHLRC3Q5JS37 347 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 PLAC9Q5JTB6 97 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 LINC00596Q86U02 117 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 LINC01356Q8N9X3 169 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 OR8G5Q8NG78 346 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 ARHGAP5-AS1Q96IT6 56 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 FGF23Q9GZV9 251 aaPredicted RBP7.38□□□□□ -1.23
TPM3-213ENST00000368545 RANGRFQ9HD47 186 aaPredicted RBP7.38□□□□□ -1.23
TPM3-213ENST00000368545 KCNJ16Q9NPI9 418 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 NUDT15Q9NV35 164 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 MCUBQ9NWR8 336 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 POLDIP2Q9Y2S7 368 aa7.38□□□□□ -1.23
TPM3-213ENST00000368545 POLEQ07864 2286 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 LRP5LA4QPB2 252 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 MEIS3P1A6NDR6 274 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 TRAPPC2LH3BP13 241 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 J3QT63 122 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 TIMM8AO60220 97 aaPredicted RBP7.37□□□□□ -1.23
TPM3-213ENST00000368545 DHFRP00374 187 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 CD74P04233 296 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 GABRR1P24046 479 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 CHRNB4P30926 498 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 MPV17P39210 176 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 NPY4RP50391 375 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 ASCL1P50553 236 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 TMEM50BP56557 158 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 MZT1Q08AG7 82 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 MEF2DQ14814 521 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 OR8G1Q15617 311 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 TATDN3Q17R31 274 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 AGAP6Q5VW22 663 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 STEAP1BQ6NZ63 245 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 Q6ZWC4 215 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 BTN2A1Q7KYR7 527 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 Q8IYB0 196 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 SPERTQ8NA61 448 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 OR4C16Q8NGL9 310 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 NUDCD2Q8WVJ2 157 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 DVL3Q92997 716 aaPredicted RBP7.37□□□□□ -1.23
TPM3-213ENST00000368545 PECRQ9BY49 303 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 TMEM100Q9NV29 134 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 PLEKHJ1Q9NW61 149 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 ANAPC10Q9UM13 185 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 ST3GAL6Q9Y274 331 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 A4D1N5 150 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 ZNF736B4DX44 427 aaPredicted RBP7.37□□□□□ -1.23
TPM3-213ENST00000368545 USP17L23D6RBM5 183 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 INMT-MINDY4F8WBC2 141 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 SFTPBP07988 381 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 TRAPPC2P0DI81 140 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 TRAPPC2BP0DI82 140 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 GLRXP35754 106 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 CCR6P51684 374 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 SLURP1P55000 103 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 FGF12P61328 243 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 ARFRP1Q13795 201 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 ZMYND11Q15326 602 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 RBMS2Q15434 407 aaKnown RBP7.37□□□□□ -1.23
TPM3-213ENST00000368545 ACTBL2Q562R1 376 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 FAM76BQ5HYJ3 339 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 CST9LP1Q5W188 147 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 ZNF554Q86TJ5 538 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 GLCCI1Q86VQ1 547 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 OR56B4Q8NH76 319 aa7.37□□□□□ -1.23
TPM3-213ENST00000368545 LILRB4Q8NHJ6 448 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms