RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 FOXB1Q99853 325 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 SCRT1Q9BWW7 348 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 ANGPTL4Q9BY76 406 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 SRXN1Q9BYN0 137 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 LYRM2Q9NU23 88 aaPredicted RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 OCIAD1Q9NX40 245 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 TREM2Q9NZC2 230 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 CHCHD2Q9Y6H1 151 aaPredicted RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 PI4KAP42356 2102 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 DNAJC13O75165 2243 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 OR5H1A6NKK0 313 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 GATCO43716 136 aaKnown RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 IGLV3-19P01714 112 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 SSR4P51571 173 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 PSG4Q00888 419 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 HIST3H3Q16695 136 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 SPANXN5Q5MJ07 72 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 TCEAL6Q6IPX3 200 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 SPSB3Q6PJ21 355 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 SELENOHQ8IZQ5 122 aaKnown RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 SMRP1Q8NCR6 262 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 OR56B2PQ8NGI1 322 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 FRZBQ92765 325 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 RBMXL1Q96E39 390 aaKnown RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 CCDC74BQ96LY2 380 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 PACRGQ96M98 296 aaPredicted RBP7.06□□□□□ -1.28
CD46-208ENST00000367042 ARV1Q9H2C2 271 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 PPP1R3CQ9UQK1 317 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 CACNA1EQ15878 2313 aa7.06□□□□□ -1.28
CD46-208ENST00000367042 A0A087X0M5 115 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 IGKV1D-13A0A0B4J2D9 117 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 ZNF816-ZNF321PA0A0X1KG74 233 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 A0A1B0GX30 115 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 BTBD17A6NE02 478 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 CD300LBA8K4G0 201 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 TRAPPC2LH3BP13 241 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 CA11O75493 328 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 IGKV1-13P0DP09 117 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 GPX4P36969 197 aaPredicted RBP7.05□□□□□ -1.28
CD46-208ENST00000367042 FAM27BQ5VT28 67 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 MRPL21Q7Z2W9 205 aaKnown RBP7.05□□□□□ -1.28
CD46-208ENST00000367042 KMT5CQ86Y97 462 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 CCDC54Q8NEL0 328 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 ZNF488Q96MN9 340 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 OPA3Q9H6K4 179 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 FRYQ5TBA9 3013 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 LOC102725191A0A1B0GVB3 256 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 WDR1O75083 606 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 CD63P08962 238 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 VDAC1P21796 283 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 ERVS71-1P61550 626 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 SLC25A53Q5H9E4 307 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 C10orf128Q5T292 105 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 BEND4Q6ZU67 534 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 RPS19BP1Q86WX3 136 aaKnown RBP7.05□□□□□ -1.28
CD46-208ENST00000367042 FGFBP3Q8TAT2 258 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 PSMF1Q92530 271 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 POM121Q96HA1 1249 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 ATP5SQ99766 215 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 ERRFI1Q9UJM3 462 aaPredicted RBP7.05□□□□□ -1.28
CD46-208ENST00000367042 DOCK11Q5JSL3 2073 aa7.05□□□□□ -1.28
CD46-208ENST00000367042 C5orf49A4QMS7 147 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 IFITM10A6NMD0 228 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 C9J4A7 227 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 CLDN34H7C241 214 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 TMEM50AO95807 157 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 P04436 131 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 BMP5P22003 454 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 CTSSP25774 331 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 OTX2P32243 289 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 PMELP40967 661 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 DSCR4P56555 118 aaPredicted RBP7.04□□□□□ -1.28
CD46-208ENST00000367042 HLA-BQ31612 363 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 WIPI1Q5MNZ9 446 aaPredicted RBP7.04□□□□□ -1.28
CD46-208ENST00000367042 WDR74Q6RFH5 385 aaPredicted RBP7.04□□□□□ -1.28
CD46-208ENST00000367042 VASH2Q86V25 355 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 ABHD3Q8WU67 409 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 C10orf35Q96D05 121 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 MALSU1Q96EH3 234 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 SSX3Q99909 188 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 CACNG5Q9UF02 275 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 LAMP3Q9UQV4 416 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 TNRC18O15417 2968 aaPredicted RBP7.04□□□□□ -1.28
CD46-208ENST00000367042 FREM1Q5H8C1 2179 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 A0A1W2PPQ1 181 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 ZNF732B4DXR9 585 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 SYNGR3O43761 229 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 DFFBO76075 338 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 HSPB1P04792 205 aaKnown RBP7.04□□□□□ -1.28
CD46-208ENST00000367042 PSG2P11465 335 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 EDN3P14138 238 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 GLIPR1P48060 266 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 CLN3Q13286 438 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 MKXQ8IYA7 352 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 KDF1Q8NAX2 398 aaPredicted RBP7.04□□□□□ -1.28
CD46-208ENST00000367042 CLDND2Q8NHS1 167 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 TMEM54Q969K7 222 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 SMIM7Q9BQ49 75 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 PRRG4Q9BZD6 226 aa7.04□□□□□ -1.28
CD46-208ENST00000367042 SMOC1Q9H4F8 434 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms