RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FUT3P21217 361 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 CCNOP22674 350 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 S100A1P23297 94 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 CDKN1AP38936 164 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 PRSS12P56730 875 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 TSPAN5P62079 268 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 IL13RA1P78552 427 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 FGL1Q08830 312 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 IL24Q13007 206 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 HLXQ14774 488 aaPredicted RBP6.94□□□□□ -1.3
CD44-205ENST00000352818 TAF9Q16594 264 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 C2orf68Q2NKX9 166 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 PIGYQ3MUY2 71 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 LGALSLQ3ZCW2 172 aaPredicted RBP6.94□□□□□ -1.3
CD44-205ENST00000352818 AADACL3Q5VUY0 350 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 ZNF660Q6AZW8 331 aaPredicted RBP6.94□□□□□ -1.3
CD44-205ENST00000352818 CYB5R2Q6BCY4 276 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 C17orf107Q6ZR85 190 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 SLC25A26Q70HW3 274 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 ZNF573Q86YE8 665 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 CALHM1Q8IU99 346 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 MARCH1Q8TCQ1 289 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 GTF3AQ92664 365 aaKnown RBP6.94□□□□□ -1.3
CD44-205ENST00000352818 HIST1H2AAQ96QV6 131 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 SULT4A1Q9BR01 284 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 C5orf66Q9H5L9 145 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 HEXA-AS1Q9H8Q6 139 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 CDH20Q9HBT6 801 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 C12orf4Q9NQ89 552 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 NECAP2Q9NVZ3 263 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 EHFQ9NZC4 300 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 NDRG3Q9UGV2 375 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 AK3Q9UIJ7 227 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 ST3GAL6Q9Y274 331 aa6.94□□□□□ -1.3
CD44-205ENST00000352818 TRBV6-6A0A0A6YYG2 114 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 RFPL4AA6NLU0 287 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 IQCF6A8MYZ5 107 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 ZNF732B4DXR9 585 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 FAM157AC9JC47 383 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 RFPL4AL1F8VTS6 287 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 TRAPPC2LH3BP13 241 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 M0R233 179 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 HS3ST1O14792 307 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 SFT2D2O95562 160 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 PLATP00750 562 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 IGLV1-44P01699 117 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 CTSDP07339 412 aaPredicted RBP6.93□□□□□ -1.3
CD44-205ENST00000352818 DANCRP0C864 163 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 SLC25A4P12235 298 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 RPA2P15927 270 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 NFYAP23511 347 aaPredicted RBP6.93□□□□□ -1.3
CD44-205ENST00000352818 HAAOP46952 286 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 ZNF81P51508 661 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 GPM6AP51674 278 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 ARPC4P59998 168 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 GMFBP60983 142 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 SEC61A1P61619 476 aaKnown RBP6.93□□□□□ -1.3
CD44-205ENST00000352818 PPP1CBP62140 327 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 SNRPD2P62316 118 aaKnown RBP6.93□□□□□ -1.3
CD44-205ENST00000352818 P2RY6Q15077 328 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 C3orf36Q3SXR2 165 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 AWAT1Q58HT5 328 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 FAM76BQ5HYJ3 339 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 NKAPLQ5M9Q1 402 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 DCAF12L2Q5VW00 463 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 LIN54Q6MZP7 749 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 TMEM65Q6PI78 240 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 C11orf88Q6PI97 169 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 UNQ6126/PRO20091Q6UXV3 157 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 GCNT2Q8N0V5 402 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 CNEP1R1Q8N9A8 125 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 WDR31Q8NA23 367 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 LILRB1Q8NHL6 650 aaPredicted RBP6.93□□□□□ -1.3
CD44-205ENST00000352818 TMEM230Q96A57 120 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 ELMOD3Q96FG2 381 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 TMEM204Q9BSN7 226 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 FAAP24Q9BTP7 215 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 ST6GALNAC5Q9BVH7 336 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 CHIAQ9BZP6 476 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 ZNF286AQ9HBT8 521 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 SPACA1Q9HBV2 294 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 SLC23A1Q9UHI7 598 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 PROCRQ9UNN8 238 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 AMDHD2Q9Y303 409 aa6.93□□□□□ -1.3
CD44-205ENST00000352818 CADP27708 2225 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 TRAV14DV4A0A0A6YYC5 116 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.92□□□□□ -1.3
CD44-205ENST00000352818 LRP5LA4QPB2 252 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 OR5H14A6NHG9 310 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 TMEM210A6NLX4 147 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 MCRIP1C9JLW8 97 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 L7N2F9 121 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 LYZL6O75951 148 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 SIX6O95475 246 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 IFNA7P01567 189 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 THBDP07204 575 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 ACAA1P09110 424 aaPredicted RBP6.92□□□□□ -1.3
CD44-205ENST00000352818 OR5H8P0DN80 308 aa6.92□□□□□ -1.3
CD44-205ENST00000352818 RPS2P15880 293 aaKnown RBP6.92□□□□□ -1.3
CD44-205ENST00000352818 CXCL2P19875 107 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms