RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 NTN3O00634 580 aaPredicted RBP20.58■□□□□ 0.89
NELFB-201ENST00000343053 DNPH1O43598 174 aa20.58■□□□□ 0.89
NELFB-201ENST00000343053 HOXB1P14653 301 aaPredicted RBP20.58■□□□□ 0.89
NELFB-201ENST00000343053 RPS23P62266 143 aaKnown RBP20.58■□□□□ 0.89
NELFB-201ENST00000343053 ZFP36L1Q07352 338 aaKnown RBP20.58■□□□□ 0.89
NELFB-201ENST00000343053 MRPL21Q7Z2W9 205 aaKnown RBP20.58■□□□□ 0.89
NELFB-201ENST00000343053 TUSC5Q8IXB3 177 aa20.58■□□□□ 0.89
NELFB-201ENST00000343053 OR1J1Q8NGS3 322 aa20.58■□□□□ 0.89
NELFB-201ENST00000343053 C11orf1Q9H5F2 150 aa20.58■□□□□ 0.89
NELFB-201ENST00000343053 NIT2Q9NQR4 276 aa20.58■□□□□ 0.89
NELFB-201ENST00000343053 TCFL5Q9UL49 500 aa20.58■□□□□ 0.89
NELFB-201ENST00000343053 MED12LQ86YW9 2145 aa20.58■□□□□ 0.88
NELFB-201ENST00000343053 FAM166BA8MTA8 275 aa20.58■□□□□ 0.88
NELFB-201ENST00000343053 LINC00587B1AMM8 73 aa20.58■□□□□ 0.88
NELFB-201ENST00000343053 CDS2O95674 445 aa20.58■□□□□ 0.88
NELFB-201ENST00000343053 ZNF343Q6P1L6 599 aa20.58■□□□□ 0.88
NELFB-201ENST00000343053 FAM180AQ6UWF9 173 aa20.58■□□□□ 0.88
NELFB-201ENST00000343053 LURAP1LQ8IV03 231 aa20.58■□□□□ 0.88
NELFB-201ENST00000343053 PRR18Q8N4B5 295 aa20.58■□□□□ 0.88
NELFB-201ENST00000343053 CHST1O43916 411 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 PAX6P26367 422 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 RAB5CP51148 216 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 ZNF266Q14584 549 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 SPSB3Q6PJ21 355 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 IL1F10Q8WWZ1 152 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 CPNE4Q96A23 557 aaPredicted RBP20.57■□□□□ 0.88
NELFB-201ENST00000343053 LYRM2Q9NU23 88 aaPredicted RBP20.57■□□□□ 0.88
NELFB-201ENST00000343053 DSPP15924 2871 aaKnown RBP20.57■□□□□ 0.88
NELFB-201ENST00000343053 UBE2CO00762 179 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 OR2C1O95371 312 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 LMO1P25800 156 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 CYB561P49447 251 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 RND3P61587 244 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 TMEM267Q0VDI3 215 aaPredicted RBP20.57■□□□□ 0.88
NELFB-201ENST00000343053 FAM86C1Q9NVL1 165 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 ZNF391Q9UJN7 358 aa20.57■□□□□ 0.88
NELFB-201ENST00000343053 RBFOX3A6NFN3 312 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 CYTIPO60759 359 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 PITX3O75364 302 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 RIPPLY2Q5TAB7 128 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 TIPARPQ7Z3E1 657 aaKnown RBP20.56■□□□□ 0.88
NELFB-201ENST00000343053 PLEKHF2Q9H8W4 249 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 MED13Q9UHV7 2174 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 ARGFXA6NJG6 315 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 WRBO00258 174 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 OR8U8P0C7N1 319 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 TRIM61Q5EBN2 209 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 TMEM105Q8N8V8 129 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 SIGLEC12Q96PQ1 595 aa20.56■□□□□ 0.88
NELFB-201ENST00000343053 S100A9P06702 114 aaKnown RBP20.55■□□□□ 0.88
NELFB-201ENST00000343053 ZDHHC23Q8IYP9 409 aa20.55■□□□□ 0.88
NELFB-201ENST00000343053 LRFN1Q9P244 771 aa20.55■□□□□ 0.88
NELFB-201ENST00000343053 TNRC6BQ9UPQ9 1833 aaKnown RBP20.55■□□□□ 0.88
NELFB-201ENST00000343053 GFRA1P56159 465 aa20.55■□□□□ 0.88
NELFB-201ENST00000343053 RNF212Q495C1 297 aa20.55■□□□□ 0.88
NELFB-201ENST00000343053 CYB561D1Q8N8Q1 229 aa20.55■□□□□ 0.88
NELFB-201ENST00000343053 SPSB4Q96A44 273 aa20.55■□□□□ 0.88
NELFB-201ENST00000343053 TMEM56Q96MV1 263 aa20.55■□□□□ 0.88
NELFB-201ENST00000343053 PRDM6Q9NQX0 595 aa20.55■□□□□ 0.88
NELFB-201ENST00000343053 TMEM56-RWDD3S4R434 201 aa20.55■□□□□ 0.88
NELFB-201ENST00000343053 TRAPPC2LH3BP13 241 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 NAPSAO96009 420 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 RPS10P46783 165 aaKnown RBP20.54■□□□□ 0.88
NELFB-201ENST00000343053 FGF12P61328 243 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 RHEBQ15382 184 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 IL22RA1Q8N6P7 574 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 CT55Q8WUE5 264 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 PRDM14Q9GZV8 571 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 H3BQ15 152 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 HNF4GQ14541 408 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 NMSQ5H8A3 153 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 SPATA46Q5T0L3 261 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 WDR5BQ86VZ2 330 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 PLPPR1Q8TBJ4 325 aa20.54■□□□□ 0.88
NELFB-201ENST00000343053 CHD3Q12873 2000 aaKnown RBP20.54■□□□□ 0.88
NELFB-201ENST00000343053 RD3LP0DJH9 198 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 SRPXP78539 464 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 RAB39BQ96DA2 213 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 THOC3Q96J01 351 aaKnown RBP20.53■□□□□ 0.88
NELFB-201ENST00000343053 TAAR9Q96RI9 348 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 SPIN2AQ99865 258 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 SPIN2BQ9BPZ2 258 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 REPIN1Q9BWE0 567 aaKnown RBP20.53■□□□□ 0.88
NELFB-201ENST00000343053 BCL2L14Q9BZR8 327 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 CLN5O75503 358 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 PLA2G5P39877 138 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 FOXO1Q12778 655 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 RNASE11Q8TAA1 199 aaKnown RBP20.53■□□□□ 0.88
NELFB-201ENST00000343053 TAAR3PQ9P1P4 343 aa20.53■□□□□ 0.88
NELFB-201ENST00000343053 GTF3C1Q12789 2109 aa20.52■□□□□ 0.88
NELFB-201ENST00000343053 FABP1P07148 127 aa20.52■□□□□ 0.88
NELFB-201ENST00000343053 TCEAL6Q6IPX3 200 aa20.52■□□□□ 0.88
NELFB-201ENST00000343053 SLC25A24Q6NUK1 477 aa20.52■□□□□ 0.88
NELFB-201ENST00000343053 LFNGQ8NES3 379 aa20.52■□□□□ 0.88
NELFB-201ENST00000343053 TCEAL3Q969E4 200 aa20.52■□□□□ 0.88
NELFB-201ENST00000343053 SLC25A31Q9H0C2 315 aa20.52■□□□□ 0.88
NELFB-201ENST00000343053 PLSCR2Q9NRY7 297 aa20.52■□□□□ 0.88
NELFB-201ENST00000343053 PLA2G3Q9NZ20 509 aa20.52■□□□□ 0.88
NELFB-201ENST00000343053 YIF1AO95070 293 aa20.51■□□□□ 0.87
NELFB-201ENST00000343053 PSG2P11465 335 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms