RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 LAMTOR1Q6IAA8 161 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 OR5AU1Q8NGC0 362 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 MBD3L1Q8WWY6 194 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 EBPLQ9BY08 206 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 OR51M1Q9H341 326 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 VAX2Q9UIW0 290 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 EXPH5Q8NEV8 1989 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 UBE2L5PA0A1B0GUS4 154 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 MS4A18H0YCH9 400 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ATP5LO75964 103 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 INHBBP09529 407 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 LIFP15018 202 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 GPR6P46095 362 aaPredicted RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 GABRA4P48169 554 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 UBE2L3P68036 154 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 MS4A18Q3C1V0 323 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 STUMQ69YW2 141 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ACSM6Q6P461 480 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 FAHD1Q6P587 224 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 OR52E1Q8NGJ3 308 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 FAM110BQ8TC76 370 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 HBEGFQ99075 208 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PRR14LQ5THK1 2151 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 OR2B11Q5JQS5 317 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM215Q68D42 235 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF787Q6DD87 383 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 TGIF2LYQ8IUE0 185 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PNKDQ8N490 385 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 C14orf79Q96F83 325 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 RASL11BQ9BPW5 248 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 HRASLSQ9HDD0 168 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 LANCL2Q9NS86 450 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 TREX1Q9NSU2 369 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 AK3Q9UIJ7 227 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PURGQ9UJV8 347 aaKnown RBP2.92□□□□□ -1.94
CSMD3-202ENST00000339701 MED13Q9UHV7 2174 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 PLXNB1O43157 2135 aa2.92□□□□□ -1.94
CSMD3-202ENST00000339701 A0A1W2PPM1 405 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 hADV38S2A0JD32 116 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM30CPA0ZSE6 113 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 HCRTR1O43613 425 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 NXPH2O95156 264 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CDKN2AP42771 156 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PLAURQ03405 335 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SRSF4Q08170 494 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF146Q15072 292 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF385CQ66K41 422 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 NPNTQ6UXI9 565 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 GPRIN1Q7Z2K8 1008 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SYT8Q8NBV8 401 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ABHD17AQ96GS6 310 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SGPP1Q9BX95 441 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CXCL16Q9H2A7 254 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TREM2Q9NZC2 230 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 JKAMPQ9P055 326 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PIPOXQ9P0Z9 390 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 RCC2Q9P258 522 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ING1Q9UK53 422 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PCOLCE2Q9UKZ9 415 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ONECUT2O95948 504 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR10J4P0C629 311 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CTRB1P17538 263 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ACP1P24666 158 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 NUTF2P61970 127 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ACSF3Q4G176 576 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CTRB2Q6GPI1 263 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 NANOGP1Q8N7R0 232 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SGK494Q96LW2 274 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 MS4A10Q96PG2 267 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM147Q9BVK8 224 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 G6PC2Q9NQR9 355 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR14J1Q9UGF5 321 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 WNT9BO14905 357 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 HCRTO43612 131 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CXorf1O96002 111 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TGFAP01135 160 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR8G3PP0DMU2 310 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 BCL3P20749 454 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PPP2CAP67775 309 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 DUSP2Q05923 314 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ALKAL1Q6UXT8 129 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 POC1AQ8NBT0 407 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OR4X2Q8NGF9 303 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 REEP6Q96HR9 211 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 RCC1LQ96I51 464 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 DNAJC30Q96LL9 226 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 PAAF1Q9BRP4 392 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 VN1R3Q9BXE9 311 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SLC25A2Q9BXI2 301 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 LAT2Q9GZY6 243 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 NOX4Q9NPH5 578 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 ACER3Q9NUN7 267 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 OSGIN1Q9UJX0 560 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 LAMTOR2Q9Y2Q5 125 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 TIMM9Q9Y5J7 89 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SOCS2O14508 198 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 CA1P00915 261 aaPredicted RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 RPL27P61353 136 aaKnown RBP2.91□□□□□ -1.94
CSMD3-202ENST00000339701 SYPL2Q5VXT5 272 aa2.91□□□□□ -1.94
CSMD3-202ENST00000339701 FAM71E1Q6IPT2 247 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms