RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 CCL2P13500 99 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 GAS1P54826 345 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 CCL8P80075 99 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 ERHP84090 104 aaKnown RBP5.93□□□□□ -1.46
SF3B1-201ENST00000335508 ZNF674Q2M3X9 581 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 ZNF808Q8N4W9 903 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-201ENST00000335508 ZIC4Q8N9L1 334 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 OR10P1Q8NGE3 313 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 HSD17B10Q99714 261 aaKnown RBP5.93□□□□□ -1.46
SF3B1-201ENST00000335508 PPIHO43447 177 aaKnown RBP5.93□□□□□ -1.46
SF3B1-201ENST00000335508 MELTFP08582 738 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 SULT1A3P0DMM9 295 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 SULT1A4P0DMN0 295 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 GLI4P10075 376 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 CXorf67Q86X51 503 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-201ENST00000335508 NTNG2Q96CW9 530 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 TAAR6Q96RI8 345 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 KIAA1456Q9P272 454 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 ANAPC1Q9H1A4 1944 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 TRDCB7Z8K6 153 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 GNB3P16520 340 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 CCL1P22362 96 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 OR3A4PP47883 348 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 INSL4Q14641 139 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 MOGAT3Q86VF5 341 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 RBMXL1Q96E39 390 aaKnown RBP5.93□□□□□ -1.46
SF3B1-201ENST00000335508 SCMH1Q96GD3 660 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 SLC35E1Q96K37 410 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 MESP1Q9BRJ9 268 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 OR2W1Q9Y3N9 320 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 OR5H14A6NHG9 310 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 F6UZH7 168 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 INHBBP09529 407 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 ATPAF1Q5TC12 328 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-201ENST00000335508 GCSAMQ8N6F7 178 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 NEIL1Q96FI4 390 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-201ENST00000335508 MS4A3Q96HJ5 214 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 WIPI2Q9Y4P8 454 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 AMMECR1Q9Y4X0 333 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-201ENST00000335508 POMT1Q9Y6A1 747 aa5.93□□□□□ -1.46
SF3B1-201ENST00000335508 NLRC5Q86WI3 1866 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 OOEPA6NGQ2 149 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 A8MXE2 369 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 C3orf80F5H4A9 247 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 NQO2P16083 231 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 TAGLN2P37802 199 aaKnown RBP5.92□□□□□ -1.46
SF3B1-201ENST00000335508 BPIFB3P59826 476 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 HES1Q14469 280 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 ZNF626Q68DY1 528 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 PRSS33Q8NF86 280 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 OR5M8Q8NGP6 311 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 RANGRFQ9HD47 186 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-201ENST00000335508 FKBP11Q9NYL4 201 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 STRAPQ9Y3F4 350 aaKnown RBP5.92□□□□□ -1.46
SF3B1-201ENST00000335508 HEATR5AQ86XA9 2040 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 KIAA2026Q5HYC2 2103 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 UMAD1C9J7I0 102 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 PYCARD-AS1I3L0S3 204 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 SOCS1O15524 211 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 HAND1O96004 215 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 PI3P19957 117 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 ATP5IP56385 69 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-201ENST00000335508 GGNQ86UU5 652 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 TGIF2LYQ8IUE0 185 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 TGIF2LXQ8IUE1 241 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 TCTE3Q8IZS6 198 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 MITD1Q8WV92 249 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 RHOVQ96L33 236 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 SPRY4Q9C004 299 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 OPN3Q9H1Y3 402 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-201ENST00000335508 DLL3Q9NYJ7 618 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 PLA2G10O15496 165 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 RRASP10301 218 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 ANXA7P20073 488 aaKnown RBP5.92□□□□□ -1.46
SF3B1-201ENST00000335508 SERPINF1P36955 418 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 TCF15Q12870 199 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 Q3ZCU0 254 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 CFAP161Q6P656 301 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 MUC15Q8N387 334 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 ZNF485Q8NCK3 441 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 RBPMSQ93062 196 aaKnown RBP5.92□□□□□ -1.46
SF3B1-201ENST00000335508 PECRQ9BY49 303 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 NAA60Q9H7X0 242 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 PIPOXQ9P0Z9 390 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 ODAMA1E959 279 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 LANCL1O43813 399 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 CD40P25942 277 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 PRDX2P32119 198 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 MC5RP33032 325 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 HLA-DRB3P79483 266 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 TLE4Q04727 773 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 BTNL3Q6UXE8 466 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 LYG1Q8N1E2 194 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 FAM222BQ8WU58 562 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 SLC25A38Q96DW6 304 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 Q96M66 194 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 PFDN5Q99471 154 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 OCEL1Q9H607 264 aa5.92□□□□□ -1.46
SF3B1-201ENST00000335508 HELZ2Q9BYK8 2649 aaKnown RBP5.92□□□□□ -1.46
SF3B1-201ENST00000335508 GEMIN2O14893 280 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms