RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 EPHA1P21709 976 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 CD27P26842 260 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 SUMO3P55854 103 aaPredicted RBP11.88□□□□□ -0.51
SYNE3-201ENST00000334258 H3F3AP84243 136 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 CLEC12BQ2HXU8 276 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 NECAP1Q8NC96 275 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 FAM86C1Q9NVL1 165 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 ST3GAL6Q9Y274 331 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 COL4A2P08572 1712 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 TRDCB7Z8K6 153 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 DLEU1O43261 78 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 OR7C1O76099 320 aaPredicted RBP11.88□□□□□ -0.51
SYNE3-201ENST00000334258 IFNA5P01569 189 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 MRPS34P82930 218 aaKnown RBP11.88□□□□□ -0.51
SYNE3-201ENST00000334258 MOB3AQ96BX8 217 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 CALHM2Q9HA72 323 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 LYRM2Q9NU23 88 aaPredicted RBP11.88□□□□□ -0.51
SYNE3-201ENST00000334258 DKKL1Q9UK85 242 aa11.88□□□□□ -0.51
SYNE3-201ENST00000334258 TRBV11-1A0A0K0K1C0 115 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 A0A0U1RQV5 110 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 B4DEV8 164 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 CHST1O43916 411 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 PPYP01298 95 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 CXCL12P48061 93 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 FGF8P55075 233 aaPredicted RBP11.87□□□□□ -0.51
SYNE3-201ENST00000334258 RPS18P62269 152 aaKnown RBP11.87□□□□□ -0.51
SYNE3-201ENST00000334258 MALLQ13021 153 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 SNAI3Q3KNW1 292 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 RABEPKQ7Z6M1 372 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 OR8G5Q8NG78 346 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 ZNF665Q9H7R5 613 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 FAM186AA6NE01 2351 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 TMEM131Q92545 1883 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 LILRA5A6NI73 299 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 PATE3B3GLJ2 98 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 C9J4A7 227 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 RPL36A-HNRNPH2H7BZ11 118 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 SRPXP78539 464 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 TLE1Q04724 770 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 PLPPR5Q32ZL2 321 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 MAFAQ8NHW3 353 aaPredicted RBP11.87□□□□□ -0.51
SYNE3-201ENST00000334258 NAT6Q93015 286 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 SPTSSAQ969W0 71 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 V9GYS6 101 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 LCATP04180 440 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 CCR5P51681 352 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 TBC1D26Q86UD7 250 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 GPR137CQ8N3F9 429 aa11.87□□□□□ -0.51
SYNE3-201ENST00000334258 A0A1B0GX78 115 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 CEBPZOSA8MTT3 80 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 ADIRFQ15847 76 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 ZNF787Q6DD87 383 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 SLC25A45Q8N413 288 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 OR10G3Q8NGC4 313 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 SNHG12Q9BXW3 62 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 TMEM222Q9H0R3 208 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 MRPS17Q9Y2R5 130 aaKnown RBP11.86□□□□□ -0.51
SYNE3-201ENST00000334258 IGHV3-15A0A0B4J1V0 119 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 ZNF732B4DXR9 585 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 CYB5R3P00387 301 aaPredicted RBP11.86□□□□□ -0.51
SYNE3-201ENST00000334258 WDR25Q64LD2 544 aaPredicted RBP11.86□□□□□ -0.51
SYNE3-201ENST00000334258 OSR2Q8N2R0 312 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 D2HGDHQ8N465 521 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 OR10A7Q8NGE5 316 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 SCGB1C1Q8TD33 95 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 P4HTMQ9NXG6 502 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 LAMP3Q9UQV4 416 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 TECTAO75443 2155 aa11.86□□□□□ -0.51
SYNE3-201ENST00000334258 LOC102723971A0A1B0GUV8 181 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 TGOLN2O43493 480 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 TMEM50AO95807 157 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 CFIP05156 583 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 APLNRP35414 380 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 IDH3GP51553 393 aaPredicted RBP11.85□□□□□ -0.51
SYNE3-201ENST00000334258 VHLLQ6RSH7 139 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 OR4X1Q8NH49 305 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 SPSB1Q96BD6 273 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 SLC7A10Q9NS82 523 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 A0A1W2PR77 199 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 A8MWP6 167 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 GZMBP10144 247 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 PNRC1Q12796 327 aaPredicted RBP11.85□□□□□ -0.51
SYNE3-201ENST00000334258 CLN3Q13286 438 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 JOSD1Q15040 202 aaPredicted RBP11.85□□□□□ -0.51
SYNE3-201ENST00000334258 CNN3Q15417 329 aaKnown RBP11.85□□□□□ -0.51
SYNE3-201ENST00000334258 SHBQ15464 509 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 C5orf24Q7Z6I8 188 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 ZNF664Q8N3J9 261 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 OR5R1Q8NH85 324 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 RSG1Q9BU20 258 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 DDA1Q9BW61 102 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 A0A1B0GU03 582 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 XKRY2A2RUG3 117 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 H3BMH7 237 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 OPN1MWP04001 364 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 OPN1MW2P0DN77 364 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 OPN1MW3P0DN78 364 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 HNF1AP20823 631 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 TAS2R30P59541 319 aa11.85□□□□□ -0.51
SYNE3-201ENST00000334258 MRPS11P82912 194 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms