RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CLDN17P56750 224 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 TAS2R30P59541 319 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 RTL6Q6ICC9 239 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 PLXDC2Q6UX71 529 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 C6orf15Q6UXA7 325 aaPredicted RBP6.55□□□□□ -1.36
CNOT4-201ENST00000315544 FBXW12Q6X9E4 464 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 PRR7Q8TB68 274 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 MAFIPQ8WZ33 124 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 LSM10Q969L4 123 aaKnown RBP6.55□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF552Q9H707 407 aaPredicted RBP6.55□□□□□ -1.36
CNOT4-201ENST00000315544 TAF9BQ9HBM6 251 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 FBN2P35556 2912 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF785A8K8V0 405 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 TPD52L2O43399 206 aaKnown RBP6.55□□□□□ -1.36
CNOT4-201ENST00000315544 PPYP01298 95 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 TNFSF10P50591 281 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 RHEBQ15382 184 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 DCAF12Q5T6F0 453 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 DNM1P34Q6PK57 102 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 HIST3H2BBQ8N257 126 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 OR2AE1Q8NHA4 323 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 SSX3Q99909 188 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF407Q9C0G0 2248 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 TRBV20OR9-2A0A075B6H5 130 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 C7orf77A4D0Y5 90 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 PGLYRP1O75594 196 aaPredicted RBP6.55□□□□□ -1.36
CNOT4-201ENST00000315544 JTBO76095 146 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 CELA3AP09093 270 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 FBP1P09467 338 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 AKR1C2P52895 323 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 AKR1C1Q04828 323 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 LHFPL2Q6ZUX7 228 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 UEVLDQ8IX04 471 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF439Q8NDP4 499 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 C12orf4Q9NQ89 552 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 CLCF1Q9UBD9 225 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 HSPB7Q9UBY9 170 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 GAB2Q9UQC2 676 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 VDAC3Q9Y277 283 aa6.55□□□□□ -1.36
CNOT4-201ENST00000315544 FAM221AA4D161 298 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 C17orf98A8MV24 154 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 M0R135 149 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 PDCD6O75340 191 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 IGKV3-15P01624 115 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HSPB1P04792 205 aaKnown RBP6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 SOD3P08294 240 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 SCTP09683 121 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 GATA4P43694 442 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 LOXL3P58215 753 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 FOXC1Q12948 553 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 AWAT1Q58HT5 328 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-201ENST00000315544 OPN5Q6U736 354 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 FAM57BQ71RH2 274 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 BCL2L2Q92843 193 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 RELTQ969Z4 430 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 SLC25A36Q96CQ1 311 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF799Q96GE5 643 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF2Q9BSG1 426 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-201ENST00000315544 TMED3Q9Y3Q3 217 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 MKRN2OSH3BPM6 223 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 XKRYO14609 159 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 SCRG1O75711 98 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 ZFAND5O76080 213 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 TNFSF15O95150 251 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 POLR2GP62487 172 aaKnown RBP eCLIP6.54□□□□□ -1.36
CNOT4-201ENST00000315544 TSPO2Q5TGU0 170 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 FAM53AQ6NSI3 398 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-201ENST00000315544 SHISA6Q6ZSJ9 500 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 TMEM252Q8N6L7 170 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 OR10G9Q8NGN4 311 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 FAM222BQ8WU58 562 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 REEP6Q96HR9 211 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 PIGLQ9Y2B2 252 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 CUL9Q8IWT3 2517 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 NKX2-6A6NCS4 301 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 CBR3O75828 277 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 ZNF205O95201 554 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 IGHG3P01860 377 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 SPINK2P20155 84 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 OR8G1Q15617 311 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 PRSS8Q16651 343 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 CXorf66Q5JRM2 361 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-201ENST00000315544 ACER2Q5QJU3 275 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 THNSL2Q86YJ6 484 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 PSMG3Q9BT73 122 aaPredicted RBP6.54□□□□□ -1.36
CNOT4-201ENST00000315544 TMEM231Q9H6L2 316 aa6.54□□□□□ -1.36
CNOT4-201ENST00000315544 IGHV3-15A0A0B4J1V0 119 aa6.53□□□□□ -1.36
CNOT4-201ENST00000315544 SFTPCP11686 197 aa6.53□□□□□ -1.36
CNOT4-201ENST00000315544 CFHR2P36980 270 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms