RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TMEM252Q8N6L7 170 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 OR10H5Q8NGA6 315 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 SNIP1Q8TAD8 396 aaKnown RBP4.64□□□□□ -1.67
VPS50-202ENST00000305866 RLN3Q8WXF3 142 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 CABLES2Q9BTV7 478 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 STRADBQ9C0K7 418 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 GP6Q9HCN6 339 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 OR2S2Q9NQN1 319 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 PADI1Q9ULC6 663 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 RNF114Q9Y508 228 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 DYSFO75923 2080 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 ASXL3Q9C0F0 2248 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 CDRT15L2A8MXV6 281 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 XRCC2O43543 280 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 NUPR1O60356 82 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 IFNA10P01566 189 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 SNRPCP09234 159 aaKnown RBP4.64□□□□□ -1.67
VPS50-202ENST00000305866 ESDP10768 282 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 ZNF20P17024 532 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 APLNRP35414 380 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 GNALP38405 381 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 ZNF92Q03936 586 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 AARDQ4LEZ3 155 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 CXorf66Q5JRM2 361 aaPredicted RBP4.64□□□□□ -1.67
VPS50-202ENST00000305866 ZNF324BQ6AW86 544 aaPredicted RBP4.64□□□□□ -1.67
VPS50-202ENST00000305866 CALHM1Q8IU99 346 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 RAB24Q969Q5 203 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 OR6C1Q96RD1 312 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 ZPBPQ9BS86 351 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 DDA1Q9BW61 102 aa4.64□□□□□ -1.67
VPS50-202ENST00000305866 DSPP15924 2871 aaKnown RBP4.63□□□□□ -1.67
VPS50-202ENST00000305866 PIGBOS1A0A0B4J2F0 54 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 ZNF503-AS2A6NEH8 195 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 OVOL3O00110 214 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 KALRNO60229 2985 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 OR2C1O95371 312 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 PTBP3O95758 552 aaKnown RBP4.63□□□□□ -1.67
VPS50-202ENST00000305866 F10P00742 488 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 RAB4AP20338 218 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 NUTF2P61970 127 aaKnown RBP4.63□□□□□ -1.67
VPS50-202ENST00000305866 PIGYQ3MUY2 71 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 ADAM5Q6NVV9 412 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 GUSBP11Q6P575 273 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 SLC23A3Q6PIS1 610 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 MED12LQ86YW9 2145 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 ZNF610Q8N9Z0 462 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 OR51G1Q8NGK1 321 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 OR2G3Q8NGZ4 309 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 ST6GALNAC5Q9BVH7 336 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 SRXN1Q9BYN0 137 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 WNT5BQ9H1J7 359 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 CA14Q9ULX7 337 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 VDAC3Q9Y277 283 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 FBXO7Q9Y3I1 522 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 LIPGQ9Y5X9 500 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 BOD1L1Q8NFC6 3051 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 FAM24AA6NFZ4 105 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 STMND1H3BQB6 276 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 WRBO00258 174 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 DVL1O14640 695 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 AADACP22760 399 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 ASCL1P50553 236 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 FUT6P51993 359 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 SPCS3P61009 180 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 CNN3Q15417 329 aaKnown RBP4.63□□□□□ -1.67
VPS50-202ENST00000305866 ZNF585BQ52M93 769 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 SLC25A26Q70HW3 274 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 TMEM183AQ8IXX5 376 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 OR1F12Q8NHA8 337 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 SPTSSAQ969W0 71 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 UCN2Q96RP3 112 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 SNHG12Q9BXW3 62 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 SMIM3Q9BZL3 60 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 A0A0J9YW62 118 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 SLC22A20A6NK97 555 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 OR5H1A6NKK0 313 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 TMEM210A6NLX4 147 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 PRSS46E5RG02 174 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 GEMIN2O14893 280 aaKnown RBP4.63□□□□□ -1.67
VPS50-202ENST00000305866 GMFGO60234 142 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 OR13C7P0DN81 318 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 BLVRBP30043 206 aaPredicted RBP4.63□□□□□ -1.67
VPS50-202ENST00000305866 SOX8P57073 446 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 PKIAP61925 76 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 GNB2P62879 340 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 SRPXP78539 464 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 Q0VFX4 171 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 FAM76BQ5HYJ3 339 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 PPP1R32Q7Z5V6 425 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 OR2C3Q8N628 320 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 LFNGQ8NES3 379 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 JSRP1Q96MG2 331 aaPredicted RBP4.63□□□□□ -1.67
VPS50-202ENST00000305866 ZNF385AQ96PM9 386 aaKnown RBP4.63□□□□□ -1.67
VPS50-202ENST00000305866 NECAP2Q9NVZ3 263 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 MEMO1Q9Y316 297 aa4.63□□□□□ -1.67
VPS50-202ENST00000305866 ZZEF1O43149 2961 aa4.62□□□□□ -1.67
VPS50-202ENST00000305866 DOCK10Q96BY6 2186 aa4.62□□□□□ -1.67
VPS50-202ENST00000305866 RAI1Q7Z5J4 1906 aaPredicted RBP4.62□□□□□ -1.67
VPS50-202ENST00000305866 IGHV3-20A0A0C4DH32 117 aa4.62□□□□□ -1.67
VPS50-202ENST00000305866 MPPED1O15442 326 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms