RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 VAMP2P63027 116 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 SUMF1Q8NBK3 374 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 LILRB1Q8NHL6 650 aaPredicted RBP20.59■□□□□ 0.89
FOXA3-201ENST00000302177 TTTY12Q9BZ98 90 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 RPS10P5Q9NQ39 176 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 IGSF23A1L1A6 192 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 BTBD17A6NE02 478 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 OR5B21A6NL26 309 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 CD300LBA8K4G0 201 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 MT-ND4LP03901 98 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 CELA3AP09093 270 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 WNT2P09544 360 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 S100GP29377 79 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 FHITP49789 147 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 NOVA1P51513 510 aaKnown RBP20.59■□□□□ 0.89
FOXA3-201ENST00000302177 ZNF573Q86YE8 665 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 HS3ST6Q96QI5 342 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 CRIM1Q9NZV1 1036 aa20.59■□□□□ 0.89
FOXA3-201ENST00000302177 EP300Q09472 2414 aaPredicted RBP20.59■□□□□ 0.89
FOXA3-201ENST00000302177 RIF1Q5UIP0 2472 aaKnown RBP20.58■□□□□ 0.89
FOXA3-201ENST00000302177 C7orf77A4D0Y5 90 aa20.58■□□□□ 0.89
FOXA3-201ENST00000302177 ZNF98A6NK75 572 aa20.58■□□□□ 0.89
FOXA3-201ENST00000302177 C9orf172C9J069 976 aa20.58■□□□□ 0.89
FOXA3-201ENST00000302177 ADAM20O43506 726 aa20.58■□□□□ 0.89
FOXA3-201ENST00000302177 CCL2P13500 99 aa20.58■□□□□ 0.89
FOXA3-201ENST00000302177 OR1C1Q15619 314 aa20.58■□□□□ 0.89
FOXA3-201ENST00000302177 C9orf135Q5VTT2 229 aa20.58■□□□□ 0.89
FOXA3-201ENST00000302177 BATF2Q8N1L9 274 aa20.58■□□□□ 0.89
FOXA3-201ENST00000302177 IFT22Q9H7X7 185 aa20.58■□□□□ 0.89
FOXA3-201ENST00000302177 LHX6Q9UPM6 363 aa20.58■□□□□ 0.89
FOXA3-201ENST00000302177 SHANK1Q9Y566 2161 aa20.58■□□□□ 0.88
FOXA3-201ENST00000302177 IGKV1D-13A0A0B4J2D9 117 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 ANKRD30BLA7E2S9 258 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 IGKV1-13P0DP09 117 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 SLC25A6P12236 298 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 RHEBQ15382 184 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 AWAT1Q58HT5 328 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 SHEQ5VZ18 495 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 ZNF880Q6PDB4 577 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 TMEM182Q6ZP80 229 aaPredicted RBP20.57■□□□□ 0.88
FOXA3-201ENST00000302177 ASCL5Q7RTU5 278 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 NEK7Q8TDX7 302 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 GNPNAT1Q96EK6 184 aaPredicted RBP20.57■□□□□ 0.88
FOXA3-201ENST00000302177 C14orf79Q96F83 325 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 CLCC1Q96S66 551 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 KCNJ16Q9NPI9 418 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 IGKV1-6A0A0C4DH72 117 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 ZNF503-AS2A6NEH8 195 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 PROB1E7EW31 1015 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 C1QL1O75973 258 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 PTAFRP25105 342 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 ATP6V0CP27449 155 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 FOXG1P55316 489 aaPredicted RBP20.57■□□□□ 0.88
FOXA3-201ENST00000302177 IL24Q13007 206 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 PCSK4Q6UW60 755 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 SUMF2Q8NBJ7 301 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 OR2G3Q8NGZ4 309 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 MRPL30Q8TCC3 161 aaKnown RBP20.57■□□□□ 0.88
FOXA3-201ENST00000302177 PKIBQ9C010 78 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 HIPK2Q9H2X6 1198 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 ESRP2Q9H6T0 727 aaKnown RBP20.57■□□□□ 0.88
FOXA3-201ENST00000302177 ZNF552Q9H707 407 aaPredicted RBP20.57■□□□□ 0.88
FOXA3-201ENST00000302177 CCL28Q9NRJ3 127 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 COA4Q9NYJ1 87 aa20.57■□□□□ 0.88
FOXA3-201ENST00000302177 PGLYRP1O75594 196 aaPredicted RBP20.56■□□□□ 0.88
FOXA3-201ENST00000302177 NGFP01138 241 aa20.56■□□□□ 0.88
FOXA3-201ENST00000302177 MAGEA5P43359 124 aa20.56■□□□□ 0.88
FOXA3-201ENST00000302177 AKR1D1P51857 326 aa20.56■□□□□ 0.88
FOXA3-201ENST00000302177 GNG3P63215 75 aa20.56■□□□□ 0.88
FOXA3-201ENST00000302177 OR8G1Q15617 311 aa20.56■□□□□ 0.88
FOXA3-201ENST00000302177 TSC22D1Q15714 1073 aa20.56■□□□□ 0.88
FOXA3-201ENST00000302177 CXorf66Q5JRM2 361 aaPredicted RBP20.56■□□□□ 0.88
FOXA3-201ENST00000302177 FAM213BQ8TBF2 198 aa20.56■□□□□ 0.88
FOXA3-201ENST00000302177 HIST1H2BAQ96A08 127 aa20.56■□□□□ 0.88
FOXA3-201ENST00000302177 CEACAM1P13688 526 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 TMEM251Q8N6I4 163 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 OR1J1Q8NGS3 322 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 C1orf196B1AJZ1 125 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 SYNGR1O43759 233 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 ZNF44P15621 663 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 RPL35P42766 123 aaKnown RBP20.55■□□□□ 0.88
FOXA3-201ENST00000302177 DCAF10Q5QP82 559 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 ZNF561Q8N587 486 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 IL22RA1Q8N6P7 574 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 PLPPR1Q8TBJ4 325 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 OR2W1Q9Y3N9 320 aa20.55■□□□□ 0.88
FOXA3-201ENST00000302177 LRP5LA4QPB2 252 aa20.54■□□□□ 0.88
FOXA3-201ENST00000302177 HSD17B6O14756 317 aa20.54■□□□□ 0.88
FOXA3-201ENST00000302177 SSSCA1O60232 199 aa20.54■□□□□ 0.88
FOXA3-201ENST00000302177 F2RP25116 425 aa20.54■□□□□ 0.88
FOXA3-201ENST00000302177 APLNRP35414 380 aa20.54■□□□□ 0.88
FOXA3-201ENST00000302177 HABP2Q14520 560 aaPredicted RBP20.54■□□□□ 0.88
FOXA3-201ENST00000302177 TMEM164Q5U3C3 297 aa20.54■□□□□ 0.88
FOXA3-201ENST00000302177 CDCP2Q5VXM1 449 aa20.54■□□□□ 0.88
FOXA3-201ENST00000302177 ZNF324BQ6AW86 544 aaPredicted RBP20.54■□□□□ 0.88
FOXA3-201ENST00000302177 CABLES2Q9BTV7 478 aa20.54■□□□□ 0.88
FOXA3-201ENST00000302177 UNKLQ9H9P5 680 aaKnown RBP20.54■□□□□ 0.88
FOXA3-201ENST00000302177 IL36RNQ9UBH0 155 aa20.54■□□□□ 0.88
FOXA3-201ENST00000302177 FAM166BA8MTA8 275 aa20.54■□□□□ 0.88
FOXA3-201ENST00000302177 NPIPB11E5RHQ5 1161 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms