RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SAT2Q96F10 170 aaPredicted RBP12.2□□□□□ -0.46
CDH3-201ENST00000264012 NDFIP1Q9BT67 221 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 AICDAQ9GZX7 198 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 B3GALNT1O75752 331 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 FAM209AQ5JX71 171 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 CHAC2Q8WUX2 184 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 ELF5Q9UKW6 265 aaPredicted RBP12.19□□□□□ -0.46
CDH3-201ENST00000264012 OR2W1Q9Y3N9 320 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 LHFPL6Q9Y693 200 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 PSME4Q14997 1843 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 A0A1W2PP11 408 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 TMEM210A6NLX4 147 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 CNN1P51911 297 aaKnown RBP12.19□□□□□ -0.46
CDH3-201ENST00000264012 R3HDM4Q96D70 268 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 MISP3Q96FF7 219 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 ZNF488Q96MN9 340 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 SCN2AQ99250 2005 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 SLC35D1Q9NTN3 355 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 TIMM9Q9Y5J7 89 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 CHEK1O14757 476 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 ZNF250P15622 560 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 C4orf17Q53FE4 359 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 LINC01590Q5TEZ4 76 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 OR2T6Q8NHC8 308 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 KCNK7Q9Y2U2 307 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 CHST1O43916 411 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 SOX15O60248 233 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 F2RP25116 425 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 EGR4Q05215 589 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 CLEC9AQ6UXN8 241 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 TIPARPQ7Z3E1 657 aaKnown RBP12.19□□□□□ -0.46
CDH3-201ENST00000264012 BVESQ8NE79 360 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 ZNF426Q9BUY5 554 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 SF3B6Q9Y3B4 125 aaKnown RBP12.19□□□□□ -0.46
CDH3-201ENST00000264012 OTOFQ9HC10 1997 aa12.19□□□□□ -0.46
CDH3-201ENST00000264012 RBP4P02753 201 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 P2RY1P47900 373 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 CDCP2Q5VXM1 449 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 CTDSP1Q9GZU7 261 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 BARX1Q9HBU1 254 aaPredicted RBP12.18□□□□□ -0.46
CDH3-201ENST00000264012 IL17BQ9UHF5 180 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 VSIG4Q9Y279 399 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 H0Y8G0 127 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 EFEMP2O95967 443 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 THY1P04216 161 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 ISG15P05161 165 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 ZNF528Q3MIS6 628 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 LYZL2Q7Z4W2 148 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 ZDHHC16Q969W1 377 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 TMEM147Q9BVK8 224 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 G3V3Q6 166 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 PIN1P1O15428 100 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 CTRB1P17538 263 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 H3F3AP84243 136 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 CTRB2Q6GPI1 263 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 LINC00596Q86U02 117 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 OR4A4PQ8NGN8 299 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 ALX4Q9H161 411 aaPredicted RBP12.18□□□□□ -0.46
CDH3-201ENST00000264012 LPAR5Q9H1C0 372 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 ATP6V1FQ16864 119 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 LGALSLQ3ZCW2 172 aaPredicted RBP12.18□□□□□ -0.46
CDH3-201ENST00000264012 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 RNF122Q9H9V4 155 aa12.18□□□□□ -0.46
CDH3-201ENST00000264012 OR5H1A6NKK0 313 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 FBP1P09467 338 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 DYNLT3P51808 116 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 FABP9Q0Z7S8 132 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 CEACAM21Q3KPI0 293 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 APCDD1LQ8NCL9 501 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 MS4A5Q9H3V2 200 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 TRBV5-7A0A0A0MS05 114 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 A0A1W2PN81 502 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 ZNF320A2RRD8 509 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 LMX1BO60663 402 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 CHRNA7P36544 502 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 CEACAM3P40198 252 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 IFITM2Q01629 132 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 TLE1Q04724 770 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 P2RY6Q15077 328 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 LINC00052Q96N35 136 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 SLC35B3Q9H1N7 401 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 ZNF665Q9H7R5 613 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 CA10Q9NS85 328 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 RIF1Q5UIP0 2472 aaKnown RBP12.17□□□□□ -0.46
CDH3-201ENST00000264012 SDK2Q58EX2 2172 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 CDS2O95674 445 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 TBX6O95947 436 aaPredicted RBP12.17□□□□□ -0.46
CDH3-201ENST00000264012 AESQ08117 197 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 GABRA6Q16445 453 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 RIPPLY2Q5TAB7 128 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 ETFRF1Q6IPR1 90 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 SLC25A38Q96DW6 304 aa12.17□□□□□ -0.46
CDH3-201ENST00000264012 AMMECR1Q9Y4X0 333 aaPredicted RBP12.17□□□□□ -0.46
CDH3-201ENST00000264012 ZNHIT1O43257 154 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 FCGR3AP08637 254 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 C1orf100Q5SVJ3 147 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 VSTM2AQ8TAG5 236 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 MRGPRFQ96AM1 343 aa12.16□□□□□ -0.46
CDH3-201ENST00000264012 TGFBR3LH3BV60 316 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms