RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 OR1P1Q8NH06 330 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 SPACA9Q96E40 222 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-201ENST00000261646 DMRTA2Q96SC8 542 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 FOXB1Q99853 325 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 TMEM9BQ9NQ34 198 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 SCN5AQ14524 2016 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 CRYM-AS1A6NIL9 109 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 AQP7P3A6NL99 342 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 HLA-GP17693 338 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 CD27P26842 260 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 LBHQ53QV2 105 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-201ENST00000261646 NUFIP2Q7Z417 695 aaKnown RBP14.18□□□□□ -0.14
SREBF1-201ENST00000261646 SHDQ96IW2 340 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 PCGF1Q9BSM1 259 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 CRISPLD2Q9H0B8 497 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 KCNIP2Q9NS61 270 aa14.18□□□□□ -0.14
SREBF1-201ENST00000261646 WDR87Q6ZQQ6 2873 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 A0A1W2PQF6 199 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 BCAT2O15382 392 aaPredicted RBP14.17□□□□□ -0.14
SREBF1-201ENST00000261646 OIT3Q8WWZ8 545 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 CIB3Q96Q77 187 aaPredicted RBP14.17□□□□□ -0.14
SREBF1-201ENST00000261646 CHST5Q9GZS9 411 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 M0QZK8 103 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 TCF21O43680 179 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 GGCTO75223 188 aaKnown RBP14.17□□□□□ -0.14
SREBF1-201ENST00000261646 MELTFP08582 738 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 OR10J1P30954 320 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 MDH2P40926 338 aaKnown RBP14.17□□□□□ -0.14
SREBF1-201ENST00000261646 SELENOVP59797 346 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 PAX5Q02548 391 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 C9orf40Q8IXQ3 194 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 H1FOOQ8IZA3 346 aaPredicted RBP14.17□□□□□ -0.14
SREBF1-201ENST00000261646 OR10AD1Q8NGE0 317 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 VN1R17PQ8TDU5 208 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 LILRA5A6NI73 299 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 OR7C2O60412 319 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 PITX3O75364 302 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 FCGR3AP08637 254 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 RAB35Q15286 201 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 ZNF573Q86YE8 665 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 ZNF576Q9H609 170 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 TUBA4BQ9H853 241 aa14.17□□□□□ -0.14
SREBF1-201ENST00000261646 PAGE4O60829 102 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 GCH1P30793 250 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 PCP4P48539 62 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 NAT6Q93015 286 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 SOX7Q9BT81 388 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 ARL2-SNX15V9GYD0 113 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 GLIPR1P48060 266 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 STPG1Q5TH74 334 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 Q6ZN92 141 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 LURAP1LQ8IV03 231 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 OR1K1Q8NGR3 316 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 TECTBQ96PL2 329 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 FAM206AQ9NX38 181 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 ST8SIA5O15466 376 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 CDC34P49427 236 aaPredicted RBP14.16□□□□□ -0.14
SREBF1-201ENST00000261646 FABP6P51161 128 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 SPINK9Q5DT21 86 aa14.16□□□□□ -0.14
SREBF1-201ENST00000261646 HIST1H1BP16401 226 aaKnown RBP14.15□□□□□ -0.14
SREBF1-201ENST00000261646 TAS2R60P59551 318 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 PLPPR2Q96GM1 343 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 MPDZO75970 2070 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 C11orf94C9JXX5 98 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 HOXC4P09017 264 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-201ENST00000261646 ZNF519Q8TB69 540 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 PISDQ9UG56 409 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 BOKQ9UMX3 212 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-201ENST00000261646 C2CD4DB7Z1M9 353 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 CNN1P51911 297 aaKnown RBP14.15□□□□□ -0.14
SREBF1-201ENST00000261646 LYRM2Q9NU23 88 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-201ENST00000261646 MTCH2Q9Y6C9 303 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 TSC2P49815 1807 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 GCGP01275 180 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 FAM3BP58499 235 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-201ENST00000261646 ZNF124Q15973 351 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 C1orf53Q5VUE5 145 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 Q8WTZ3 238 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 MRGPRFQ96AM1 343 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 ANAPC16Q96DE5 110 aa14.15□□□□□ -0.14
SREBF1-201ENST00000261646 RTBDNQ9BSG5 229 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-201ENST00000261646 SPINT2O43291 252 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 CRYAAP02489 173 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 CCR5P51681 352 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 LINC00114Q6XXX2 140 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 OR5B3Q8NH48 314 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 KCNK17Q96T54 332 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 PTPRDP23468 1912 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 LSM6P62312 80 aaKnown RBP14.14□□□□□ -0.15
SREBF1-201ENST00000261646 ARG2P78540 354 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 FZD5Q13467 585 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 C12orf49Q9H741 205 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 OR10V1Q8NGI7 309 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 RAB24Q969Q5 203 aa14.14□□□□□ -0.15
SREBF1-201ENST00000261646 TRAV39A0A0B4J263 110 aa14.13□□□□□ -0.15
SREBF1-201ENST00000261646 CXCL12P48061 93 aa14.13□□□□□ -0.15
SREBF1-201ENST00000261646 DUSP3P51452 185 aaPredicted RBP14.13□□□□□ -0.15
SREBF1-201ENST00000261646 SPNS3Q6ZMD2 512 aa14.13□□□□□ -0.15
SREBF1-201ENST00000261646 OR5AU1Q8NGC0 362 aa14.13□□□□□ -0.15
SREBF1-201ENST00000261646 TUBD1Q9UJT1 453 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms