RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 EID2BQ96D98 161 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ZG16BQ96DA0 208 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 SMIM3Q9BZL3 60 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ISG20L2Q9H9L3 353 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 MYEF2Q9P2K5 600 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 AKAP6Q13023 2319 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CLDN34H7C241 214 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CD5P06127 495 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 MUC1P15941 1255 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 LRRC29Q8WV35 223 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 MRPL32Q9BYC8 188 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 GNB4Q9HAV0 340 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 NAT8Q9UHE5 227 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 V9GYS6 101 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 C7orf66A4D0T2 115 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 M0R1X1 148 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ISLRO14498 428 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 USF1P22415 310 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CSF2RBP32927 897 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 SEZ6L2Q6UXD5 910 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CLRN3Q8NCR9 226 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 GPR82Q96P67 336 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 DIDO1Q9BTC0 2240 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 INTS1Q8N201 2190 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 SERTM2A0A1B0GWG4 89 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 SUCLG1P53597 346 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 C3orf36Q3SXR2 165 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 FHL5Q5TD97 284 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ALKAL2Q6UX46 152 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 C9orf40Q8IXQ3 194 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 MOB3AQ96BX8 217 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 LURAP1Q96LR2 239 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 FYTTD1Q96QD9 318 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 IQCF6A8MYZ5 107 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 MGST1P10620 155 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 FAM166AQ6J272 317 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 Q8WTZ3 238 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ADIPOR1Q96A54 375 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CMBLQ96DG6 245 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 NAA50Q9GZZ1 169 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TOLLIPQ9H0E2 274 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 WNT9BO14905 357 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 PRICKLE3O43900 615 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TOX4O94842 621 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 SRP14P37108 136 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 Q3ZCU0 254 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 MESTQ5EB52 335 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 PDPNQ86YL7 162 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM130Q8N3G9 435 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 FAM24AA6NFZ4 105 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 K7N7A8 449 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TCAPO15273 167 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 GALR1P47211 349 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CMC4P56277 68 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 RBM11P57052 281 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ERVS71-1P61550 626 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 HERVK_113P61574 105 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 LINC01559Q495D7 138 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF774Q6NX45 483 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM217Q8N7C4 229 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM104Q8NE00 496 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ARHGAP5-AS1Q96IT6 56 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 RASL11BQ9BPW5 248 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TCF20Q9UGU0 1960 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TRAV9-1A0A075B6T8 112 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 A0A1B0GW15 77 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ZNF729A6NN14 1252 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 HPXP02790 462 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 FAM106CPP0CH98 169 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 BMP5P22003 454 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 RND3P61587 244 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 FAM3AP98173 230 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ANKRD55Q3KP44 614 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 FFAR4Q5NUL3 377 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TIMM23BQ5SRD1 257 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 GPR179Q6PRD1 2367 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 MMD2Q8IY49 270 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CNTD2Q9H8S5 307 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 G6PC2Q9NQR9 355 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 GNG13Q9P2W3 67 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 JPT1Q9UK76 154 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 OR5G3P0C626 314 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 LPAR6P43657 344 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 GNB2P62879 340 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 MRPS11P82912 194 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 LINC00303Q3SY05 128 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 C9orf135Q5VTT2 229 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 Q6ZS52 159 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 ZCCHC14Q8WYQ9 949 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TMEM54Q969K7 222 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 FLYWCH2Q96CP2 140 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 VAX2Q9UIW0 290 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 HSPB8Q9UJY1 196 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 TRBV5-7A0A0A0MS05 114 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 CTXND1A0A1B0GTU2 59 aa3.78□□□□□ -1.8
VPS13C-202ENST00000261517 NUPL2O15504 423 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 PPIHO43447 177 aaKnown RBP3.78□□□□□ -1.8
VPS13C-202ENST00000261517 SCGB1D1O95968 90 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms