RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 SMDT1Q9H4I9 107 aa8.1□□□□□ -1.11
SRSF6-201ENST00000244020 PRDM13Q9H4Q3 707 aa8.1□□□□□ -1.11
SRSF6-201ENST00000244020 CLDN16Q9Y5I7 305 aa8.1□□□□□ -1.11
SRSF6-201ENST00000244020 RFNGQ9Y644 331 aa8.1□□□□□ -1.11
SRSF6-201ENST00000244020 TDRD6O60522 2096 aaKnown RBP8.1□□□□□ -1.11
SRSF6-201ENST00000244020 PRRX1P54821 245 aa8.1□□□□□ -1.11
SRSF6-201ENST00000244020 YPEL5P62699 121 aa8.1□□□□□ -1.11
SRSF6-201ENST00000244020 THEM4Q5T1C6 240 aa8.1□□□□□ -1.11
SRSF6-201ENST00000244020 ZNF468Q5VIY5 522 aaPredicted RBP8.1□□□□□ -1.11
SRSF6-201ENST00000244020 C16orf47Q6ZP98 133 aaPredicted RBP8.1□□□□□ -1.11
SRSF6-201ENST00000244020 ATXN7O15265 892 aaPredicted RBP8.09□□□□□ -1.11
SRSF6-201ENST00000244020 CLPSP04118 112 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 LINC00271P0C7V0 271 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 PLP1P60201 277 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 FZD2Q14332 565 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 SHDQ96IW2 340 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 OR51B6Q9H340 312 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 PIGLQ9Y2B2 252 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 GVINP1Q7Z2Y8 2422 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 NPIPB7O75200 414 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 IGHMP01871 453 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 CRISP2P16562 243 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 KIR2DL1P43626 348 aaPredicted RBP8.09□□□□□ -1.11
SRSF6-201ENST00000244020 EFNA3P52797 238 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 HIST3H2BBQ8N257 126 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 LRRC18Q8N456 261 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 OR2AE1Q8NHA4 323 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 CUTCQ9NTM9 273 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 MCTS1Q9ULC4 181 aaKnown RBP8.09□□□□□ -1.11
SRSF6-201ENST00000244020 SELENOKQ9Y6D0 94 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 ZNF43P17038 809 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 TMEM108Q6UXF1 575 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 C9orf40Q8IXQ3 194 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 C20orf196Q8IYI0 205 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 OR10AD1Q8NGE0 317 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 OR10S1Q8NGN2 331 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 OR5C1Q8NGR4 320 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 GPBAR1Q8TDU6 330 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 SMOC1Q9H4F8 434 aa8.09□□□□□ -1.11
SRSF6-201ENST00000244020 CACNA1GO43497 2377 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 CHRNB4P30926 498 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 TMEM176BQ3YBM2 270 aaPredicted RBP8.08□□□□□ -1.12
SRSF6-201ENST00000244020 LIAT1Q6ZQX7 453 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 LANCL3Q6ZV70 420 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 ZNF721Q8TF20 911 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 ZNF775Q96BV0 537 aaPredicted RBP8.08□□□□□ -1.12
SRSF6-201ENST00000244020 IL23AQ9NPF7 189 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 TECRQ9NZ01 308 aaKnown RBP8.08□□□□□ -1.12
SRSF6-201ENST00000244020 KIAA1456Q9P272 454 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 ZNF319Q9P2F9 582 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 LHFPL6Q9Y693 200 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 A0A1W2PQD3 144 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 TNFRSF4P43489 277 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 UQCRFS1P47985 274 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 ZNF133P52736 654 aaPredicted RBP8.08□□□□□ -1.12
SRSF6-201ENST00000244020 ATP6V1FQ16864 119 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 ARSJQ5FYB0 599 aaPredicted RBP8.08□□□□□ -1.12
SRSF6-201ENST00000244020 SAPCD1Q5SSQ6 148 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 DMRTC2Q8IXT2 367 aaPredicted RBP8.08□□□□□ -1.12
SRSF6-201ENST00000244020 OR2T10Q8NGZ9 312 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 M1APQ8TC57 530 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 BLNKQ8WV28 456 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 MISP3Q96FF7 219 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 MRGPRX1Q96LB2 322 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 RPP25Q9BUL9 199 aaKnown RBP8.08□□□□□ -1.12
SRSF6-201ENST00000244020 MMACHCQ9Y4U1 282 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 HS3ST3B1Q9Y662 390 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 IGHV3-20A0A0C4DH32 117 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 HSD17B6O14756 317 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 ZNF253O75346 499 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 SRP19P09132 144 aaKnown RBP8.08□□□□□ -1.12
SRSF6-201ENST00000244020 GFERP55789 205 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 TMEM241Q24JQ0 296 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 MPV17LQ2QL34 196 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 OR11L1Q8NGX0 322 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 IFI44Q8TCB0 444 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 C1orf147Q96MC9 270 aaPredicted RBP8.08□□□□□ -1.12
SRSF6-201ENST00000244020 KCNIP1Q9NZI2 227 aa8.08□□□□□ -1.12
SRSF6-201ENST00000244020 IGKV1-9A0A0C4DH69 117 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 GAGE10A6NGK3 116 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 K7N7A8 449 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 TSPAN2O60636 221 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 DDAH2O95865 285 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 GYPAP02724 150 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 SNRPCP09234 159 aaKnown RBP8.07□□□□□ -1.12
SRSF6-201ENST00000244020 OR5G3P0C626 314 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 OR10J4P0C629 311 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 GLIPR1P48060 266 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 BLKP51451 505 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 CD81P60033 236 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 ERVFC1-1P60608 527 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 LSM6P62312 80 aaKnown RBP8.07□□□□□ -1.12
SRSF6-201ENST00000244020 RUNX1Q01196 453 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 C17orf67Q0P5P2 114 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 MFAP5Q13361 173 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 CDCP2Q5VXM1 449 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 DHRS13Q6UX07 377 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 UNQ6494/PRO21346Q6UXR6 183 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 OR5AU1Q8NGC0 362 aa8.07□□□□□ -1.12
SRSF6-201ENST00000244020 PIGCQ92535 297 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms