RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 UCP1P25874 307 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 ATP6V0CP27449 155 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 NMSQ5H8A3 153 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 SPINK14Q6IE38 97 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 C6orf15Q6UXA7 325 aaPredicted RBP13.94□□□□□ -0.18
LTBR-201ENST00000228918 MRPL21Q7Z2W9 205 aaKnown RBP13.94□□□□□ -0.18
LTBR-201ENST00000228918 CLEC18CQ8NCF0 446 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 TMEM171Q8WVE6 324 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 PLEKHF2Q9H8W4 249 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 KCNJ16Q9NPI9 418 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 PRDM6Q9NQX0 595 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 MTCH1Q9NZJ7 389 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 LRFN1Q9P244 771 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 A0A1B0GV50 99 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 C5orf49A4QMS7 147 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 ZNF503-AS2A6NEH8 195 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 COX5BP10606 129 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 LHX2P50458 406 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 CXorf66Q5JRM2 361 aaPredicted RBP13.94□□□□□ -0.18
LTBR-201ENST00000228918 TMEM252Q8N6L7 170 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 OR2G3Q8NGZ4 309 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 ISOC2Q96AB3 205 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 SIGLEC12Q96PQ1 595 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 GPHA2Q96T91 129 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 ZNF703Q9H7S9 590 aaPredicted RBP13.94□□□□□ -0.18
LTBR-201ENST00000228918 LOXL2Q9Y4K0 774 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 RFNGQ9Y644 331 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 FREM2Q5SZK8 3169 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 KMT2EQ8IZD2 1858 aa13.94□□□□□ -0.18
LTBR-201ENST00000228918 IGKV1-6A0A0C4DH72 117 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 KIR2DS1A0A191URI9 304 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 A0A1W2PPH5 198 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 A6NLC8 198 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 ZNF732B4DXR9 585 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 SS18L1O75177 396 aaPredicted RBP13.93□□□□□ -0.18
LTBR-201ENST00000228918 CLN5O75503 358 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 KIR2DS4P43632 304 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 FOXG1P55316 489 aaPredicted RBP13.93□□□□□ -0.18
LTBR-201ENST00000228918 SRYQ05066 204 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 KIR2DS1Q14954 304 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 RHEBQ15382 184 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 TGIF1Q15583 401 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 ODF3L1Q8IXM7 274 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 APOBEC3DQ96AK3 386 aaPredicted RBP13.93□□□□□ -0.18
LTBR-201ENST00000228918 PRRG4Q9BZD6 226 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 SLC25A31Q9H0C2 315 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 MAGT1Q9H0U3 335 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 GLRX2Q9NS18 164 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 COLQQ9Y215 455 aaPredicted RBP13.93□□□□□ -0.18
LTBR-201ENST00000228918 ATP23Q9Y6H3 246 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 ZNF729A6NN14 1252 aaPredicted RBP13.93□□□□□ -0.18
LTBR-201ENST00000228918 PROB1E7EW31 1015 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 TRAPPC2LH3BP13 241 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 HSPB6O14558 160 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 CELA3AP09093 270 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 OR8U8P0C7N1 319 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 DAOP14920 347 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 OMGP23515 440 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 CLDN18P56856 261 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 VAMP2P63027 116 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 TUSC5Q8IXB3 177 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 OR8G5Q8NG78 346 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 OR1J1Q8NGS3 322 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 CCL28Q9NRJ3 127 aa13.93□□□□□ -0.18
LTBR-201ENST00000228918 HSD17B6O14756 317 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 VDAC1P21796 283 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 EIF2S3P41091 472 aaKnown RBP13.92□□□□□ -0.18
LTBR-201ENST00000228918 SULT1A1P50225 295 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 ID3Q02535 119 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 MKXQ8IYA7 352 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 OR2M7Q8NG81 312 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 OR5C1Q8NGR4 320 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 PLPPR1Q8TBJ4 325 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 CD300LFQ8TDQ1 290 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 NEK7Q8TDX7 302 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 THOC3Q96J01 351 aaKnown RBP13.92□□□□□ -0.18
LTBR-201ENST00000228918 FAM173AQ9BQD7 235 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 SMDT1Q9H4I9 107 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 CALHM2Q9HA72 323 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 GPR37O15354 613 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 TXNL1O43396 289 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 NEURL1O76050 574 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 TMEM50AO95807 157 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 CTXN2P0C2S0 81 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 OR13C7P0DN81 318 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 SSTP61278 116 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 KRBOX4Q5JUW0 171 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 SPSB3Q6PJ21 355 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 TCTEX1D2Q8WW35 142 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 ABHD14AQ9BUJ0 271 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 ZNF552Q9H707 407 aaPredicted RBP13.92□□□□□ -0.18
LTBR-201ENST00000228918 DMRT1Q9Y5R6 373 aa13.92□□□□□ -0.18
LTBR-201ENST00000228918 CDRT15L2A8MXV6 281 aa13.91□□□□□ -0.18
LTBR-201ENST00000228918 H0Y980 276 aa13.91□□□□□ -0.18
LTBR-201ENST00000228918 SYNGR1O43759 233 aa13.91□□□□□ -0.18
LTBR-201ENST00000228918 MMP9P14780 707 aa13.91□□□□□ -0.18
LTBR-201ENST00000228918 ACP1P24666 158 aa13.91□□□□□ -0.18
LTBR-201ENST00000228918 DYNLT3P51808 116 aa13.91□□□□□ -0.18
LTBR-201ENST00000228918 ZFP62Q8NB50 900 aaPredicted RBP13.91□□□□□ -0.18
LTBR-201ENST00000228918 OR5D13Q8NGL4 314 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms