RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 DUX4L3P0CJ86 424 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 DUX4L4P0CJ87 422 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 DUX4L5P0CJ88 424 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 DUX4L6P0CJ89 424 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 DUX4L7P0CJ90 424 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 LMO1P25800 156 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 CMTM1Q8IZ96 169 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 GLYATL2Q8WU03 294 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 MSI2Q96DH6 328 aaKnown RBP14.93□□□□□ -0.02
GCDH-201ENST00000222214 KIRREL1Q96J84 757 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 C18orf12Q96KH6 178 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 ZNF471Q9BX82 626 aaPredicted RBP14.93□□□□□ -0.02
GCDH-201ENST00000222214 SLC25A32Q9H2D1 315 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 DUX4Q9UBX2 424 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 TMED3Q9Y3Q3 217 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 SHANK1Q9Y566 2161 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 C3orf85A0A1B0GTC6 90 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 A8MXE2 369 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 H0YIZ8 118 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 SIRPB1O00241 398 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 PHF1O43189 567 aaPredicted RBP14.93□□□□□ -0.02
GCDH-201ENST00000222214 HAND1O96004 215 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 PCSK4Q6UW60 755 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 C20orf204Q6ZNR8 217 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 MRGPRGQ86SM5 289 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 C11orf53Q8IXP5 236 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 PRR7Q8TB68 274 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 CNTNAP3BQ96NU0 1288 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 CNTNAP3Q9BZ76 1288 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 SLC5A7Q9GZV3 580 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 TAAR3PQ9P1P4 343 aa14.93□□□□□ -0.02
GCDH-201ENST00000222214 ZFHX4Q86UP3 3567 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 IGKV1-6A0A0C4DH72 117 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 A6NLC8 198 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 F5H0A9 414 aaPredicted RBP14.92□□□□□ -0.02
GCDH-201ENST00000222214 M0R1B8 84 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 ZNF250P15622 560 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 GLRXP35754 106 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 ZNF83P51522 516 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 RPS23P62266 143 aaKnown RBP14.92□□□□□ -0.02
GCDH-201ENST00000222214 NHLH1Q02575 133 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 IGFBP7Q16270 282 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 SP6Q3SY56 376 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 Q6ZR03 302 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 SSX8Q7RTT4 187 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 COMMD7Q86VX2 200 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 STOML3Q8TAV4 291 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 SECTM1Q8WVN6 248 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 MRPL24Q96A35 216 aaKnown RBP14.92□□□□□ -0.02
GCDH-201ENST00000222214 MARVELD3Q96A59 401 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 MBNL3Q9NUK0 354 aaKnown RBP14.92□□□□□ -0.02
GCDH-201ENST00000222214 OR2W1Q9Y3N9 320 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 WIPI2Q9Y4P8 454 aa14.92□□□□□ -0.02
GCDH-201ENST00000222214 DUXBA0A1W2PPF3 345 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 NMBP08949 121 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 LUMP51884 338 aaPredicted RBP14.91□□□□□ -0.02
GCDH-201ENST00000222214 S100A10P60903 97 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 WDR82Q6UXN9 313 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 DOLPP1Q86YN1 238 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 H1FOOQ8IZA3 346 aaPredicted RBP14.91□□□□□ -0.02
GCDH-201ENST00000222214 Q8NA96 180 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 OR11L1Q8NGX0 322 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 TMEM222Q9H0R3 208 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 ELOVL5Q9NYP7 299 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 TRAPPC2LQ9UL33 140 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 IFNL4K9M1U5 179 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 GFRA3O60609 400 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 IGHV3-13P01766 116 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 RCC1P18754 421 aaPredicted RBP14.91□□□□□ -0.02
GCDH-201ENST00000222214 CD200P41217 278 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 UCNP55089 124 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 SMIM21Q3B7S5 101 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 BEX5Q5H9J7 111 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 ACP7Q6ZNF0 438 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 PDZD9Q8IXQ8 264 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 LILRB1Q8NHL6 650 aaPredicted RBP14.91□□□□□ -0.02
GCDH-201ENST00000222214 OR5AC2Q9NZP5 309 aa14.91□□□□□ -0.02
GCDH-201ENST00000222214 TAAR5O14804 337 aa14.9□□□□□ -0.02
GCDH-201ENST00000222214 DEDDO75618 318 aa14.9□□□□□ -0.02
GCDH-201ENST00000222214 PTBP3O95758 552 aaKnown RBP14.9□□□□□ -0.02
GCDH-201ENST00000222214 TBC1D26Q86UD7 250 aa14.9□□□□□ -0.02
GCDH-201ENST00000222214 CISD2Q8N5K1 135 aaKnown RBP14.9□□□□□ -0.02
GCDH-201ENST00000222214 PLPPR1Q8TBJ4 325 aa14.9□□□□□ -0.02
GCDH-201ENST00000222214 TMEM56Q96MV1 263 aa14.9□□□□□ -0.02
GCDH-201ENST00000222214 SHARPINQ9H0F6 387 aa14.9□□□□□ -0.02
GCDH-201ENST00000222214 MSL2Q9HCI7 577 aa14.9□□□□□ -0.02
GCDH-201ENST00000222214 FZR1Q9UM11 496 aa14.9□□□□□ -0.02
GCDH-201ENST00000222214 TMEM56-RWDD3S4R434 201 aa14.9□□□□□ -0.02
GCDH-201ENST00000222214 CUL9Q8IWT3 2517 aa14.89□□□□□ -0.03
GCDH-201ENST00000222214 TMEM30CPA0ZSE6 113 aa14.89□□□□□ -0.03
GCDH-201ENST00000222214 TPT1P13693 172 aaKnown RBP14.89□□□□□ -0.03
GCDH-201ENST00000222214 TMPRSS3P57727 454 aa14.89□□□□□ -0.03
GCDH-201ENST00000222214 NKX6-1P78426 367 aaPredicted RBP14.89□□□□□ -0.03
GCDH-201ENST00000222214 GFRALQ6UXV0 394 aa14.89□□□□□ -0.03
GCDH-201ENST00000222214 ZNF818PQ6ZRF7 136 aa14.89□□□□□ -0.03
GCDH-201ENST00000222214 OR10Z1Q8NGY1 313 aa14.89□□□□□ -0.03
GCDH-201ENST00000222214 OR1S1Q8NH92 325 aa14.89□□□□□ -0.03
GCDH-201ENST00000222214 TP53RKQ96S44 253 aa14.89□□□□□ -0.03
GCDH-201ENST00000222214 ZNF835Q9Y2P0 537 aa14.89□□□□□ -0.03
GCDH-201ENST00000222214 UBE2J1Q9Y385 318 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms