RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 CSRP2Q16527 193 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 ERGIC1Q969X5 290 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 RNF126Q9BV68 326 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 OSGIN2Q9Y236 505 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 ZNF705GA8MUZ8 300 aaPredicted RBP11.74□□□□□ -0.53
RAB3D-201ENST00000222120 ACTL6AO96019 429 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 ZNF708P17019 499 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 FOXG1P55316 489 aaPredicted RBP11.74□□□□□ -0.53
RAB3D-201ENST00000222120 RUNX1Q01196 453 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 ZNF154Q13106 437 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 RNF212Q495C1 297 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 CXorf66Q5JRM2 361 aaPredicted RBP11.74□□□□□ -0.53
RAB3D-201ENST00000222120 LDLRAD3Q86YD5 345 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 MIOXQ9UGB7 285 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 TERTO14746 1132 aaKnown RBP11.74□□□□□ -0.53
RAB3D-201ENST00000222120 AGFG2O95081 481 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 OR2C1O95371 312 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 HKR1P10072 659 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 DVL1P1P54792 670 aaPredicted RBP11.74□□□□□ -0.53
RAB3D-201ENST00000222120 SOX8P57073 446 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 DHODHQ02127 395 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 MSMO1Q15800 293 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 ZIC4Q8N9L1 334 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 PSENENQ9NZ42 101 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 DNAH14Q0VDD8 3507 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 NUDT19A8MXV4 375 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 IFNA10P01566 189 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 SELEP16581 610 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 CATR1Q13166 79 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 OR2J1Q9GZK6 312 aa11.74□□□□□ -0.53
RAB3D-201ENST00000222120 TSTD3H0UI37 97 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 SRSF10O75494 262 aaKnown RBP11.73□□□□□ -0.53
RAB3D-201ENST00000222120 HMGN3Q15651 99 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 DEFB124Q8NES8 71 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 PCNX2A6NKB5 2137 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 B4E171 279 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 DNPH1O43598 174 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 SYNGR3O43761 229 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 TSPAN7P41732 249 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 DYNLT3P51808 116 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 SRSF3P84103 164 aaKnown RBP11.73□□□□□ -0.53
RAB3D-201ENST00000222120 FAM209BQ5JX69 171 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 CST9LP1Q5W188 147 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 MDP1Q86V88 176 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 TPRX1Q8N7U7 411 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 SAT2Q96F10 170 aaPredicted RBP11.73□□□□□ -0.53
RAB3D-201ENST00000222120 SSX3Q99909 188 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 PINLYPA6NC86 204 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 SOX15O60248 233 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 RNPS1Q15287 305 aaKnown RBP11.73□□□□□ -0.53
RAB3D-201ENST00000222120 TECTBQ96PL2 329 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 NRIP2Q9BQI9 281 aa11.73□□□□□ -0.53
RAB3D-201ENST00000222120 MYOZ1Q9NP98 299 aaPredicted RBP11.73□□□□□ -0.53
RAB3D-201ENST00000222120 CRYM-AS1A6NIL9 109 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 LINC01387J3KSC0 135 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 DNASE2O00115 360 aaPredicted RBP11.72□□□□□ -0.53
RAB3D-201ENST00000222120 DFFBO76075 338 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 EWSR1Q01844 656 aaKnown RBP eCLIP11.72□□□□□ -0.53
RAB3D-201ENST00000222120 C9orf152Q5JTZ5 239 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 HIST2H3AQ71DI3 136 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 NUFIP2Q7Z417 695 aaKnown RBP11.72□□□□□ -0.53
RAB3D-201ENST00000222120 POC1AQ8NBT0 407 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 OR1K1Q8NGR3 316 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 PNRC2Q9NPJ4 139 aaKnown RBP11.72□□□□□ -0.53
RAB3D-201ENST00000222120 LNP1A1A4G5 178 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 OR3A1P47881 315 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 FGF8P55075 233 aaPredicted RBP11.72□□□□□ -0.53
RAB3D-201ENST00000222120 ERVK-16P61578 105 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 COL19A1Q14993 1142 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 C4orf17Q53FE4 359 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 TMEM211Q6ICI0 200 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 CPEB3Q8NE35 698 aaKnown RBP11.72□□□□□ -0.53
RAB3D-201ENST00000222120 MUCL1Q96DR8 90 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 SH3BGRL3Q9H299 93 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 ZNF552Q9H707 407 aaPredicted RBP11.72□□□□□ -0.53
RAB3D-201ENST00000222120 PRR14LQ5THK1 2151 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 PPP1R2P9O14990 202 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 DEDDO75618 318 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 MECP2P51608 486 aaKnown RBP11.72□□□□□ -0.53
RAB3D-201ENST00000222120 ADIRFQ15847 76 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 FAM185AQ8N0U4 392 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 MRGPRFQ96AM1 343 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 MSL2Q9HCI7 577 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 V9GYS6 101 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 HEATR1Q9H583 2144 aaKnown RBP11.72□□□□□ -0.53
RAB3D-201ENST00000222120 AKAP6Q13023 2319 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 TRDCB7Z8K6 153 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 PPP1CBP62140 327 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 KCNMB1Q16558 191 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 NCMAPQ5T1S8 102 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 HIST2H3PS2Q5TEC6 136 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 OR5B12Q96R08 314 aa11.72□□□□□ -0.53
RAB3D-201ENST00000222120 HEYLQ9NQ87 328 aaPredicted RBP11.72□□□□□ -0.53
RAB3D-201ENST00000222120 CLEC18AA5D8T8 446 aa11.71□□□□□ -0.53
RAB3D-201ENST00000222120 HBE1P02100 147 aa11.71□□□□□ -0.53
RAB3D-201ENST00000222120 SP1P08047 785 aa11.71□□□□□ -0.53
RAB3D-201ENST00000222120 ANOS1P23352 680 aa11.71□□□□□ -0.53
RAB3D-201ENST00000222120 IL13RA2Q14627 380 aa11.71□□□□□ -0.53
RAB3D-201ENST00000222120 AWAT1Q58HT5 328 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms