RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 MT-CO3P00414 261 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 C21orf58P58505 322 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 COTL1Q14019 142 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 OR5AU1Q8NGC0 362 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 FLYWCH2Q96CP2 140 aaKnown RBP13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 UCN2Q96RP3 112 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 FBLL1A6NHQ2 334 aaKnown RBP13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 ANKRD55Q3KP44 614 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 CADM4Q8NFZ8 388 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 OR2D3Q8NGH3 330 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 ASB10Q8WXI3 467 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 MEGF10Q96KG7 1140 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 C1QCP02747 245 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 BCL3P20749 454 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 IER3P46695 156 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 LSM6P62312 80 aaKnown RBP13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 C3AR1Q16581 482 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 PIGYQ3MUY2 71 aa13.16□□□□□ -0.3
NDFIP2-201ENST00000218652 A0A1B0GUL6 1792 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 SNURFLB1AK76 121 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 J3KRW8 73 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 ATP6V0CP27449 155 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 GAB4Q2WGN9 574 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 SLC35E4Q6ICL7 350 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 PPP1R3EQ9H7J1 279 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 IL17BQ9UHF5 180 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 SIRT4Q9Y6E7 314 aaPredicted RBP13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 ELOA3CA0A087WX78 387 aaPredicted RBP13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 LINC00862A6NCI5 91 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 OR4A8P0C604 315 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 SMIM6P0DI80 62 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 IRF3Q14653 427 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 TMEM97Q5BJF2 176 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 MRPL30Q8TCC3 161 aaKnown RBP13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 HDHD3Q9BSH5 251 aaPredicted RBP13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 ELOVL1Q9BW60 279 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 RGPD5Q99666 1765 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 OR2T8A6NH00 312 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 FAM90A27PA6NNH2 459 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 SIGLEC5O15389 551 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 CDS2O95674 445 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 MMP16P51512 607 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 SIGLEC14Q08ET2 396 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 FDX2Q6P4F2 183 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 TUSC5Q8IXB3 177 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 OR8I2Q8N0Y5 310 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 ZNF383Q8NA42 475 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 LHFPL5Q8TAF8 219 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 MED12Q93074 2177 aa13.15□□□□□ -0.3
NDFIP2-201ENST00000218652 EML2O95834 649 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 APELAP0DMC3 54 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 MPLP40238 635 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 C8orf82Q6P1X6 216 aaPredicted RBP13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 MRGPRGQ86SM5 289 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 VN1R17PQ8TDU5 208 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 ADAT3Q96EY9 351 aaPredicted RBP13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 HTN1P15515 57 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 TMEM255AQ5JRV8 349 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 VSTM2AQ8TAG5 236 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 CENPVL1A0A0U1RR11 272 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 RCC1P18754 421 aaPredicted RBP13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 PSMB2P49721 201 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 FOXC1Q12948 553 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 LILRB1Q8NHL6 650 aaPredicted RBP13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 ABHD3Q8WU67 409 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 MANBALQ9NQG1 85 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 ORM1P02763 201 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 CCL4P13236 92 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 SUCLG1P53597 346 aaKnown RBP13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 NANOS3P60323 173 aaKnown RBP13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 RUNX1Q01196 453 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 TRA2AQ13595 282 aaKnown RBP eCLIP13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 NPAS1Q99742 590 aa13.14□□□□□ -0.31
NDFIP2-201ENST00000218652 TMSB15BA0A087X1C1 80 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 HELTA6NFD8 242 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 GNG7O60262 68 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 P01737 135 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 PMELP40967 661 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 ADTRPQ96IZ2 230 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 NEU3Q9UQ49 428 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 C5orf52A6NGY3 159 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 C1QL1O75973 258 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 PRRX1P54821 245 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 SSPNQ14714 243 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 RBM14Q96PK6 669 aaKnown RBP13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 IGHV1OR15-9A0A0B4J2B8 117 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 C7orf66A4D0T2 115 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 MMP9P14780 707 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 RPL30P62888 115 aaKnown RBP13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 UBE2V2Q15819 145 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 ZNF71Q9NQZ8 489 aaPredicted RBP13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 SLX4Q8IY92 1834 aa13.13□□□□□ -0.31
NDFIP2-201ENST00000218652 MBPP02686 304 aaPredicted RBP13.12□□□□□ -0.31
NDFIP2-201ENST00000218652 GZMHP20718 246 aa13.12□□□□□ -0.31
NDFIP2-201ENST00000218652 EPHA8P29322 1005 aaPredicted RBP13.12□□□□□ -0.31
NDFIP2-201ENST00000218652 ZNF137PP52743 207 aa13.12□□□□□ -0.31
NDFIP2-201ENST00000218652 NXPH1P58417 271 aa13.12□□□□□ -0.31
NDFIP2-201ENST00000218652 SLC35B1P78383 322 aa13.12□□□□□ -0.31
NDFIP2-201ENST00000218652 DCAF12L2Q5VW00 463 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms