RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 MT-ND4P03905 459 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 PAX5Q02548 391 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 ZNF273Q14593 569 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 HACD4Q5VWC8 232 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 MRPL30Q8TCC3 161 aaKnown RBP22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 C12orf4Q9NQ89 552 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 DOCK11Q5JSL3 2073 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 PPIAL4CA0A0B4J2A2 164 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 PPIAL4GP0DN37 164 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 GLP1RP43220 463 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 GZMKP49863 264 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 GNG2P59768 71 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 TMEM200BQ69YZ2 307 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 TCF23Q7RTU1 214 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 SETD6Q8TBK2 473 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 ARHGAP32A7KAX9 2087 aa22.49■■□□□ 1.19
CHMP4B-201ENST00000217402 IGHV2-70DA0A0C4DH43 119 aa22.48■■□□□ 1.19
CHMP4B-201ENST00000217402 hADV38S2A0JD32 116 aa22.48■■□□□ 1.19
CHMP4B-201ENST00000217402 ENSAO43768 121 aaKnown RBP22.48■■□□□ 1.19
CHMP4B-201ENST00000217402 HLA-DQB1P01920 261 aa22.48■■□□□ 1.19
CHMP4B-201ENST00000217402 OR13A1Q8NGR1 328 aa22.48■■□□□ 1.19
CHMP4B-201ENST00000217402 TRAPPC2LQ9UL33 140 aa22.48■■□□□ 1.19
CHMP4B-201ENST00000217402 POLR3KQ9Y2Y1 108 aaPredicted RBP22.48■■□□□ 1.19
CHMP4B-201ENST00000217402 TRGV10A0A0A0MS01 117 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 A0A0G2JMP0 313 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 A0A0X1KG70 313 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 NAPSAO96009 420 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 ZNF16P17020 682 aaPredicted RBP22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 PAX2Q02962 417 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 MEF2CQ06413 473 aaPredicted RBP22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 IL18Q14116 193 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 C11orf91Q3C1V1 193 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 GAPTQ8N292 157 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 OR4M2Q8NGB6 313 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 C8orf46Q8TAG6 207 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 MRGPRDQ8TDS7 321 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 LPAR3Q9UBY5 353 aa22.47■■□□□ 1.19
CHMP4B-201ENST00000217402 TGFAP01135 160 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 CCL3L1P16619 93 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 GUCA2AQ02747 115 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 PNLIPRP3Q17RR3 467 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 Q6ZPA2 131 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 LY6G5BQ8NDX9 201 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 DACT3Q96B18 629 aaPredicted RBP22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 OR6C3Q9NZP0 311 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 ONECUT1Q9UBC0 465 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 LINC00312Q9Y6C7 94 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 CELSR1Q9NYQ6 3014 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 LIPFP07098 398 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 RCC1P18754 421 aaPredicted RBP22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 CYB5R2Q6BCY4 276 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 FAM131AQ6UXB0 335 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 CCDC190Q86UF4 302 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 TMEM186Q96B77 213 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 C18orf12Q96KH6 178 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 HIF1ANQ9NWT6 349 aa22.46■■□□□ 1.19
CHMP4B-201ENST00000217402 FABP12A6NFH5 140 aa22.45■■□□□ 1.18
CHMP4B-201ENST00000217402 SSX5O60225 188 aa22.45■■□□□ 1.18
CHMP4B-201ENST00000217402 MELTFP08582 738 aa22.45■■□□□ 1.18
CHMP4B-201ENST00000217402 RNASE12Q5GAN4 147 aaKnown RBP22.45■■□□□ 1.18
CHMP4B-201ENST00000217402 BTNL3Q6UXE8 466 aa22.45■■□□□ 1.18
CHMP4B-201ENST00000217402 BAIAP2L2Q6UXY1 529 aa22.45■■□□□ 1.18
CHMP4B-201ENST00000217402 ABHD1Q96SE0 405 aa22.45■■□□□ 1.18
CHMP4B-201ENST00000217402 RIMS4Q9H426 269 aaPredicted RBP22.45■■□□□ 1.18
CHMP4B-201ENST00000217402 ZNF230Q9UIE0 474 aaPredicted RBP22.45■■□□□ 1.18
CHMP4B-201ENST00000217402 ZANQ9Y493 2812 aa22.45■■□□□ 1.18
CHMP4B-201ENST00000217402 YLPM1P49750 1951 aaKnown RBP22.44■■□□□ 1.18
CHMP4B-201ENST00000217402 TRAV20A0A0B4J274 112 aa22.44■■□□□ 1.18
CHMP4B-201ENST00000217402 MEIOCA2RUB1 952 aa22.44■■□□□ 1.18
CHMP4B-201ENST00000217402 GLCCI1Q86VQ1 547 aa22.44■■□□□ 1.18
CHMP4B-201ENST00000217402 ZNF565Q8N9K5 539 aa22.44■■□□□ 1.18
CHMP4B-201ENST00000217402 MAFIPQ8WZ33 124 aa22.44■■□□□ 1.18
CHMP4B-201ENST00000217402 NCOR1P1Q9H4R4 102 aa22.44■■□□□ 1.18
CHMP4B-201ENST00000217402 KIR2DS1A0A191URI9 304 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 MEIS3P1A6NDR6 274 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 FCGR3AP08637 254 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 PRSS3P35030 304 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 SSTR5P35346 364 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 PITPNAQ00169 270 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 SPANXN2Q5MJ10 180 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 DCAF12L2Q5VW00 463 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 UBALD1Q8TB05 177 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 ZNF714Q96N38 554 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 UBE2J1Q9Y385 318 aaPredicted RBP22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 INSIG2Q9Y5U4 225 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 V9GYH0 126 aa22.43■■□□□ 1.18
CHMP4B-201ENST00000217402 ARF6P62330 175 aa22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 A0A1W2PPH5 198 aa22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 FCER2P06734 321 aa22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 INHBBP09529 407 aa22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 ZNF728P0DKX0 622 aa22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 DVL1P1P54792 670 aaPredicted RBP22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 PYHIN1Q6K0P9 492 aa22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 C5orf24Q7Z6I8 188 aa22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 PRR18Q8N4B5 295 aa22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 CORO2AQ92828 525 aa22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 MBNL3Q9NUK0 354 aaKnown RBP22.42■■□□□ 1.18
CHMP4B-201ENST00000217402 DSCAML1Q8TD84 2053 aa22.41■■□□□ 1.18
CHMP4B-201ENST00000217402 TRBV6-6A0A0A6YYG2 114 aa22.41■■□□□ 1.18
CHMP4B-201ENST00000217402 ACANP16112 2415 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms