RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 SEC61A1P61619 476 aaKnown RBP10.21□□□□□ -0.77
LINC00339-213ENST00000642137 PNLIPRP3Q17RR3 467 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 BAIAP2L2Q6UXY1 529 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 GDPD3Q7L5L3 318 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 GAPTQ8N292 157 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 OR4M1Q8NGD0 313 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 PLPPR1Q8TBJ4 325 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 NEK7Q8TDX7 302 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 C15orf40Q8WUR7 153 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 ST8SIA4Q92187 359 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 DMRTB1Q96MA1 342 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 ETAA1Q9NY74 926 aa10.21□□□□□ -0.77
LINC00339-213ENST00000642137 POLQO75417 2590 aa10.21□□□□□ -0.78
LINC00339-213ENST00000642137 NAV2Q8IVL1 2488 aa10.21□□□□□ -0.78
LINC00339-213ENST00000642137 LOC105371242A0A075B767 164 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 H7C1Q1 480 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 HSPB6O14558 160 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 HLA-DQB1P01920 261 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 MT-ND4P03905 459 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 IL2RGP31785 369 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 TAS2R20P59543 309 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 PITPNAQ00169 270 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 MEF2CQ06413 473 aaPredicted RBP10.2□□□□□ -0.78
LINC00339-213ENST00000642137 AESQ08117 197 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 KRBOX4Q5JUW0 171 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 TMEM69Q5SWH9 247 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 HACD4Q5VWC8 232 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 RSBN1Q5VWQ0 802 aaPredicted RBP10.2□□□□□ -0.78
LINC00339-213ENST00000642137 CNIH2Q6PI25 160 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 BTN2A1Q7KYR7 527 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 CCDC190Q86UF4 302 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 FGFRL1Q8N441 504 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 DTX3Q8N9I9 347 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 CORO2AQ92828 525 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 COQ2Q96H96 371 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 SOSTQ9BQB4 213 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 DCTN5Q9BTE1 182 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 AUNIPQ9H7T9 357 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 ZMAT3Q9HA38 289 aaKnown RBP10.2□□□□□ -0.78
LINC00339-213ENST00000642137 AK3Q9UIJ7 227 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 ITPR2Q14571 2701 aa10.2□□□□□ -0.78
LINC00339-213ENST00000642137 MALRD1Q5VYJ5 2156 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 TACC2O95359 2948 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 TRBV23-1A0A0A0MS06 115 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 TRBV6-6A0A0A6YYG2 114 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 FABP12A6NFH5 140 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 KIAA1324LA8MWY0 1029 aaPredicted RBP10.19□□□□□ -0.78
LINC00339-213ENST00000642137 FAM157AC9JC47 383 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 CD3GP09693 182 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 PTBP1P26599 531 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00339-213ENST00000642137 ZFP36P26651 326 aaKnown RBP10.19□□□□□ -0.78
LINC00339-213ENST00000642137 ETV6P41212 452 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 GLIPR1P48060 266 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 P2RX3P56373 397 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 EDDM3BP56851 147 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 ATXN7L3Q14CW9 347 aaPredicted RBP10.19□□□□□ -0.78
LINC00339-213ENST00000642137 CR1LQ2VPA4 569 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 ZNF497Q6ZNH5 498 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 RTN4RL2Q86UN3 420 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 IZUMO1Q8IYV9 350 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 LY6G5BQ8NDX9 201 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 C8orf46Q8TAG6 207 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 H1FXQ92522 213 aaKnown RBP10.19□□□□□ -0.78
LINC00339-213ENST00000642137 CMSS1Q9BQ75 279 aaKnown RBP10.19□□□□□ -0.78
LINC00339-213ENST00000642137 LPAR3Q9UBY5 353 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 MRPS7Q9Y2R9 242 aaKnown RBP10.19□□□□□ -0.78
LINC00339-213ENST00000642137 DSCAML1Q8TD84 2053 aa10.19□□□□□ -0.78
LINC00339-213ENST00000642137 CR1P17927 2039 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 MEIKINA0A087WXM9 373 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 PPIAL4CA0A0B4J2A2 164 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 hADV38S2A0JD32 116 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 TMEM30CPA0ZSE6 113 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 ODAMA1E959 279 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 TMEM235A6NFC5 223 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 B4DSR2 109 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 SULT1C2O00338 296 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 PHF1O43189 567 aaPredicted RBP10.18□□□□□ -0.78
LINC00339-213ENST00000642137 NAPSAO96009 420 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 LIPFP07098 398 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 GZMHP20718 246 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 PRSS3P35030 304 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 GZMKP49863 264 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 GNG2P59768 71 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 RPL31P62899 125 aaKnown RBP10.18□□□□□ -0.78
LINC00339-213ENST00000642137 MRPS15P82914 257 aaKnown RBP10.18□□□□□ -0.78
LINC00339-213ENST00000642137 ARFRP1Q13795 201 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 EDDM3AQ14507 147 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 SRSF7Q16629 238 aaKnown RBP eCLIP10.18□□□□□ -0.78
LINC00339-213ENST00000642137 OLFML2AQ68BL7 652 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 PYHIN1Q6K0P9 492 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 TPRX1Q8N7U7 411 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 ZNF565Q8N9K5 539 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 LINC01356Q8N9X3 169 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 MRPL30Q8TCC3 161 aaKnown RBP10.18□□□□□ -0.78
LINC00339-213ENST00000642137 DYRK2Q92630 601 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 CYYR1Q96J86 154 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 ABHD1Q96SE0 405 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 ING3Q9NXR8 418 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 OR6C3Q9NZP0 311 aa10.18□□□□□ -0.78
LINC00339-213ENST00000642137 KIF25Q9UIL4 384 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms