RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 RGS13O14921 159 aa16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 Q1RN00 199 aa16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 PDPNQ86YL7 162 aa16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 HTR1DP28221 377 aa16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 HLA-DRB3P79483 266 aa16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 NUDT16L1Q9BRJ7 211 aaKnown RBP16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 COA4Q9NYJ1 87 aa16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 GNG7O60262 68 aa16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 VAMP3Q15836 100 aa16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 TSPO2Q5TGU0 170 aa16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 RNASEKQ6P5S7 137 aaKnown RBP16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 OR1B1Q8NGR6 318 aa16.1■□□□□ 0.17
KCNMA1-278ENST00000640141 PRSS3P2Q8NHM4 247 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 CLEC5AQ9NY25 188 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 PRNDQ9UKY0 176 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 TPRP12270 2363 aaKnown RBP16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 CRHP06850 196 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 HIST1H3AP68431 136 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 RPEL1Q2QD12 228 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 VAMP8Q9BV40 100 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 UBTD1Q9HAC8 227 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 MANBALQ9NQG1 85 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 CCL28Q9NRJ3 127 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 SLC7A10Q9NS82 523 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 CHST1O43916 411 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 CLEC9AQ6UXN8 241 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 DNAJC13O75165 2243 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 INPP5JQ15735 1006 aaPredicted RBP16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 ZNF441Q8N8Z8 693 aa16.09■□□□□ 0.17
KCNMA1-278ENST00000640141 FCN1O00602 326 aa16.08■□□□□ 0.17
KCNMA1-278ENST00000640141 NGFRP08138 427 aa16.08■□□□□ 0.17
KCNMA1-278ENST00000640141 ACAA2P42765 397 aaKnown RBP16.08■□□□□ 0.17
KCNMA1-278ENST00000640141 GAMTQ14353 236 aa16.08■□□□□ 0.17
KCNMA1-278ENST00000640141 WDR73Q6P4I2 378 aa16.08■□□□□ 0.17
KCNMA1-278ENST00000640141 C1orf174Q8IYL3 243 aa16.08■□□□□ 0.17
KCNMA1-278ENST00000640141 TTTY12Q9BZ98 90 aa16.08■□□□□ 0.17
KCNMA1-278ENST00000640141 TREM2Q9NZC2 230 aa16.08■□□□□ 0.17
KCNMA1-278ENST00000640141 PIPOXQ9P0Z9 390 aa16.08■□□□□ 0.17
KCNMA1-278ENST00000640141 INSIG2Q9Y5U4 225 aa16.08■□□□□ 0.17
KCNMA1-278ENST00000640141 SPINK4O60575 86 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 OR1L1Q8NH94 360 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 C12orf57Q99622 126 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 NXF2Q9GZY0 626 aaKnown RBP16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 DTX4Q9Y2E6 619 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 OR2W1Q9Y3N9 320 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 SPINK2P20155 84 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 SLC25A42Q86VD7 318 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 OR4A4PQ8NGN8 299 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 OR5R1Q8NH85 324 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 LPAR3Q9UBY5 353 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 NAGKQ9UJ70 344 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 APC2O95996 2303 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 TEX50A0A1B0GTY4 177 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 ZP4Q12836 540 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 DUXBA0A1W2PPF3 345 aa16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 FGF8P55075 233 aaPredicted RBP16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 FLYWCH2Q96CP2 140 aaKnown RBP16.08■□□□□ 0.16
KCNMA1-278ENST00000640141 NUP214P35658 2090 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 KIAA1324LA8MWY0 1029 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 VSIG8P0DPA2 414 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 PNRC1Q12796 327 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 SLC2A9Q9NRM0 540 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 TRAV8-7A0A075B6U6 113 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 RBFOX3A6NFN3 312 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 HNRNPA3P51991 378 aaKnown RBP16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 EIF4EBP2Q13542 120 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 PLPPR5Q32ZL2 321 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 HPXP02790 462 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 IRF3Q14653 427 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 IQCJQ1A5X6 159 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 MDP1Q86V88 176 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 C10orf111Q8N326 155 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 FAM210BQ96KR6 192 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 V9GYH0 126 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 RPL36A-HNRNPH2H7BZ11 118 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 ACP1P24666 158 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 ZNF385AQ96PM9 386 aaKnown RBP16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 RNF122Q9H9V4 155 aa16.07■□□□□ 0.16
KCNMA1-278ENST00000640141 MED19A0JLT2 244 aaPredicted RBP16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 CDS2O95674 445 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 LSM11P83369 360 aaKnown RBP eCLIP16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 CLN8Q9UBY8 286 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 PTP4A3O75365 173 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 ZNF205O95201 554 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 GABRA6Q16445 453 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 ANGPTL6Q8NI99 470 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 OR2T8A6NH00 312 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 NEURL1O76050 574 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 TOMM20LQ6UXN7 152 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 MRPS18AQ9NVS2 196 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 KCNMB2Q9Y691 235 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 FAM27BQ5VT28 67 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 LOXL4Q96JB6 756 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 WISP3O95389 354 aaPredicted RBP16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 HOXD4P09016 255 aaPredicted RBP16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 GZMMP51124 257 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 NHLH1Q02575 133 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 NHLH2Q02577 135 aa16.06■□□□□ 0.16
KCNMA1-278ENST00000640141 PIGYQ3MUY2 71 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms