RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 CTDSPLO15194 276 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 SOCS1O15524 211 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 ENSAO43768 121 aaKnown RBP10.47□□□□□ -0.73
PNKP-217ENST00000625216 CSTBP04080 98 aaKnown RBP10.47□□□□□ -0.73
PNKP-217ENST00000625216 GTF2F2P13984 249 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 MUC1P15941 1255 aaPredicted RBP10.47□□□□□ -0.73
PNKP-217ENST00000625216 RBM11P57052 281 aaKnown RBP10.47□□□□□ -0.73
PNKP-217ENST00000625216 ACTG1P63261 375 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 GPR176Q14439 515 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 PIGYQ3MUY2 71 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 TEX36Q5VZQ5 186 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 SFRP4Q6FHJ7 346 aaPredicted RBP10.47□□□□□ -0.73
PNKP-217ENST00000625216 ELP2Q6IA86 826 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 C16orf87Q6PH81 154 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 ZNF826PQ6ZT77 177 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 MKXQ8IYA7 352 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 OSR2Q8N2R0 312 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 FAM89BQ8N5H3 189 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 ZDHHC22Q8N966 263 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 BOLLQ8N9W6 283 aaKnown RBP10.47□□□□□ -0.73
PNKP-217ENST00000625216 C19orf18Q8NEA5 215 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 OR51T1Q8NGJ9 327 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 C22orf15Q8WYQ4 148 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 TRIM63Q969Q1 353 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 MS4A7Q9GZW8 240 aaPredicted RBP10.47□□□□□ -0.73
PNKP-217ENST00000625216 ZMAT3Q9HA38 289 aaKnown RBP10.47□□□□□ -0.73
PNKP-217ENST00000625216 PALMDQ9NP74 551 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 DIABLOQ9NR28 239 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 KAAG1Q9UBP8 84 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 ZNF69Q9UC07 566 aa10.47□□□□□ -0.73
PNKP-217ENST00000625216 ARHGAP32A7KAX9 2087 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 A0A1W2PQ09 198 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 METTL21EPA6NDL7 271 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 HAX1O00165 279 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 CDIPTO14735 213 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 ADAM20O43506 726 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 LANCL1O43813 399 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 ZNF780AO75290 641 aaPredicted RBP10.46□□□□□ -0.73
PNKP-217ENST00000625216 ECDO95905 644 aaPredicted RBP10.46□□□□□ -0.73
PNKP-217ENST00000625216 CYB5AP00167 134 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 PGA5P0DJD9 388 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 GABRR1P24046 479 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 SNU13P55769 128 aaKnown RBP10.46□□□□□ -0.73
PNKP-217ENST00000625216 TMEM50BP56557 158 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 FGF12P61328 243 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 ERVK11-1P61568 191 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 UBA52P62987 128 aaKnown RBP10.46□□□□□ -0.73
PNKP-217ENST00000625216 HOXA4Q00056 320 aaPredicted RBP10.46□□□□□ -0.73
PNKP-217ENST00000625216 GUCA2AQ02747 115 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 MICBQ29980 383 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 ZNF260Q3ZCT1 412 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 PLAC9Q5JTB6 97 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 STEAP3Q658P3 488 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 SIGIRRQ6IA17 410 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 LYSMD2Q8IV50 215 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 OR8H2Q8N162 312 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 Q8N402 240 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 SIGLECL1Q8N7X8 197 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 POC1AQ8NBT0 407 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 OR56B1Q8NGI3 324 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 OR10R2Q8NGX6 335 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 OR10Z1Q8NGY1 313 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 SMIM4Q8WVI0 70 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 PHF21AQ96BD5 680 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 NRIP2Q9BQI9 281 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 ESM1Q9NQ30 184 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 RABL2AQ9UBK7 228 aaPredicted RBP10.46□□□□□ -0.73
PNKP-217ENST00000625216 ELF5Q9UKW6 265 aaPredicted RBP10.46□□□□□ -0.73
PNKP-217ENST00000625216 RABL2BQ9UNT1 228 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 POLDIP2Q9Y2S7 368 aa10.46□□□□□ -0.73
PNKP-217ENST00000625216 MEIOCA2RUB1 952 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 TMEM235A6NFC5 223 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 MFNGO00587 321 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 GPR37O15354 613 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 GSTZ1O43708 216 aaPredicted RBP10.45□□□□□ -0.74
PNKP-217ENST00000625216 SCGNO76038 276 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 TPPPO94811 219 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 CHRM2P08172 466 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 CD3GP09693 182 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 HIST1H1DP16402 221 aaKnown RBP10.45□□□□□ -0.74
PNKP-217ENST00000625216 PRKACAP17612 351 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 EGR1P18146 543 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 PRTN3P24158 256 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 PITPNAQ00169 270 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 TAF9Q16594 264 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 NHLRC3Q5JS37 347 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 OLFML2AQ68BL7 652 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 RAB12Q6IQ22 244 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 WDR82Q6UXN9 313 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 FAM90A1Q86YD7 464 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 CHST4Q8NCG5 386 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 OR52I2Q8NH67 350 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 LRRC29Q8WV35 223 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 EMG1Q92979 244 aaKnown RBP10.45□□□□□ -0.74
PNKP-217ENST00000625216 MRPS24Q96EL2 167 aaKnown RBP10.45□□□□□ -0.74
PNKP-217ENST00000625216 DMRTB1Q96MA1 342 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 CTSZQ9UBR2 303 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 KCNK7Q9Y2U2 307 aa10.45□□□□□ -0.74
PNKP-217ENST00000625216 SRRM5B3KS81 715 aa10.44□□□□□ -0.74
PNKP-217ENST00000625216 C22orf46C9J442 243 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms