RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 C9orf170A2RU37 121 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 TRDCB7Z8K6 153 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 GRNP28799 593 aaKnown RBP18.09■□□□□ 0.49
SPAST-204ENST00000621856 FCGR2CP31995 323 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 IL13RA1P78552 427 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 SPRNQ5BIV9 151 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 SHEQ5VZ18 495 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 C11orf88Q6PI97 169 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 NLRC3Q7RTR2 1065 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 TMEM185AQ8NFB2 350 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 DLL4Q9NR61 685 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 RASL12Q9NYN1 266 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 NPTNQ9Y639 398 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 COL6A6A6NMZ7 2263 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 FAM172BPA6NC97 362 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 H7C1Q1 480 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 ZNF205O95201 554 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 ATXN7L3Q14CW9 347 aaPredicted RBP18.08■□□□□ 0.48
SPAST-204ENST00000621856 KCNJ8Q15842 424 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 TMEM128Q5BJH2 165 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 IGSF11Q5DX21 431 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 PRR7Q8TB68 274 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 PLPPR1Q8TBJ4 325 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 CASTOR1Q8WTX7 329 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 RTBDNQ9BSG5 229 aaPredicted RBP18.08■□□□□ 0.48
SPAST-204ENST00000621856 LIME1Q9H400 295 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 TREM2Q9NZC2 230 aa18.08■□□□□ 0.48
SPAST-204ENST00000621856 PLCE1Q9P212 2302 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 CD3EP07766 207 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 SCTP09683 121 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 EGR1P18146 543 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 GZMKP49863 264 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 FXYD4P59646 89 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 SEC61A1P61619 476 aaKnown RBP18.07■□□□□ 0.48
SPAST-204ENST00000621856 CDSNQ15517 529 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 C2orf68Q2NKX9 166 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 C20orf204Q6ZNR8 217 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 TOMM40LQ969M1 308 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 TMEM230Q96A57 120 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 IL19Q9UHD0 177 aa18.07■□□□□ 0.48
SPAST-204ENST00000621856 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.06■□□□□ 0.48
SPAST-204ENST00000621856 RFPL4AA6NLU0 287 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 SRRM5B3KS81 715 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 SHISA9B4DS77 424 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 RFPL4AL1F8VTS6 287 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 SLC22A5O76082 557 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 GIPP09681 153 aaPredicted RBP18.06■□□□□ 0.48
SPAST-204ENST00000621856 ZNF728P0DKX0 622 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 ERP29P30040 261 aaKnown RBP18.06■□□□□ 0.48
SPAST-204ENST00000621856 RBMXP38159 391 aaKnown RBP18.06■□□□□ 0.48
SPAST-204ENST00000621856 HERV-K104P61576 105 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 SORDQ00796 357 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 ZNF880Q6PDB4 577 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 ZNF497Q6ZNH5 498 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 ZFAND1Q8TCF1 268 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 ZNF486Q96H40 463 aaPredicted RBP18.06■□□□□ 0.48
SPAST-204ENST00000621856 PHB2Q99623 299 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 FXYD6Q9H0Q3 95 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 DNAJB11Q9UBS4 358 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 SLC23A1Q9UHI7 598 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 PKD1L2Q7Z442 2459 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 BET1O15155 118 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 SIX6O95475 246 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 NFYAP23511 347 aaPredicted RBP18.06■□□□□ 0.48
SPAST-204ENST00000621856 LMO1P25800 156 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 CFHR2P36980 270 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 HLA-DRB3P79483 266 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 MOB1BQ7L9L4 216 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 C5orf24Q7Z6I8 188 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 OR5T2Q8NGG2 359 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 DHRS9Q9BPW9 319 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 CLEC4MQ9H2X3 399 aaPredicted RBP18.06■□□□□ 0.48
SPAST-204ENST00000621856 RANBP3Q9H6Z4 567 aaPredicted RBP18.06■□□□□ 0.48
SPAST-204ENST00000621856 TRAPPC2LQ9UL33 140 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 WIPI2Q9Y4P8 454 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 ITPR1Q14643 2758 aa18.06■□□□□ 0.48
SPAST-204ENST00000621856 TK1P04183 234 aa18.05■□□□□ 0.48
SPAST-204ENST00000621856 CTSDP07339 412 aaPredicted RBP18.05■□□□□ 0.48
SPAST-204ENST00000621856 CTXN2P0C2S0 81 aa18.05■□□□□ 0.48
SPAST-204ENST00000621856 RCC1P18754 421 aaPredicted RBP18.05■□□□□ 0.48
SPAST-204ENST00000621856 GATA4P43694 442 aa18.05■□□□□ 0.48
SPAST-204ENST00000621856 DHODHQ02127 395 aa18.05■□□□□ 0.48
SPAST-204ENST00000621856 DMRTC2Q8IXT2 367 aaPredicted RBP18.05■□□□□ 0.48
SPAST-204ENST00000621856 OR2T35Q8NGX2 323 aa18.05■□□□□ 0.48
SPAST-204ENST00000621856 MITD1Q8WV92 249 aa18.05■□□□□ 0.48
SPAST-204ENST00000621856 DIRC2Q96SL1 478 aa18.05■□□□□ 0.48
SPAST-204ENST00000621856 TPRP12270 2363 aaKnown RBP18.05■□□□□ 0.48
SPAST-204ENST00000621856 POM121CA8CG34 1229 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 IFNL4K9M1U5 179 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 PSPNO60542 156 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 DUS4LO95620 317 aaKnown RBP18.04■□□□□ 0.48
SPAST-204ENST00000621856 TFF1P04155 84 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 AADACP22760 399 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 SERPINF1P36955 418 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 RAP2BP61225 183 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 COL10A1Q03692 680 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 LIN54Q6MZP7 749 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 FAM90A1Q86YD7 464 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 GCSAMQ8N6F7 178 aa18.04■□□□□ 0.48
SPAST-204ENST00000621856 MOB3AQ96BX8 217 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms