RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 ZNF420Q8TAQ5 688 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 KPTNQ9Y664 436 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 LINC00854A0A1B0GVQ3 168 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 CLPSP04118 112 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 METAP1P53582 386 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 HILS1P60008 231 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 FAM53AQ6NSI3 398 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 CCBE1Q6UXH8 406 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 TOMM20LQ6UXN7 152 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 TMEM256Q8N2U0 113 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 MARCH4Q9P2E8 410 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 COX15Q7KZN9 410 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ZNF511Q8NB15 262 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 TMEM54Q969K7 222 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 F8WEM9 126 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 PTNP21246 168 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 LEPP41159 167 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 SELENOWP63302 87 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 OGFRL1Q5TC84 451 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 KCNS1Q96KK3 526 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 SIX2Q9NPC8 291 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 NRIP3Q9NQ35 241 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 METTL1Q9UBP6 276 aaKnown RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 ZNF727A8MUV8 499 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ZNF593O00488 134 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 HTN1P15515 57 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 NPBWR2P48146 333 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 SSX7Q7RTT5 188 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ARHGEF39Q8N4T4 335 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 SLC7A10Q9NS82 523 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 A0A1W2PNV4 684 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 C17orf51A8MQB3 221 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 INSP01308 110 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 HTR2AP28223 471 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 UCP3P55916 312 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 PLA2G2CQ5R387 149 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 FAM71CQ8NEG0 241 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 WFDC5Q8TCV5 224 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 STON2Q8WXE9 905 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 TRGV4A0A0C4DH28 118 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 TM4SF5O14894 197 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 MGPP08493 103 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 MFAP4P55083 255 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 HLXQ14774 488 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 DYRK2Q92630 601 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 CHST6Q9GZX3 395 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 GPR173Q9NS66 373 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 NTN3O00634 580 aaPredicted RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 COX5BP10606 129 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 TMEM97Q5BJF2 176 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ZNF781Q8N8C0 355 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 LKAAEAR1Q8TD35 194 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 GALNT14Q96FL9 552 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 ZNF488Q96MN9 340 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 PARD6AQ9NPB6 346 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 FLRT3Q9NZU0 649 aa2.91□□□□□ -1.94
LPP-220ENST00000617246 LSM5Q9Y4Y9 91 aaKnown RBP2.91□□□□□ -1.94
LPP-220ENST00000617246 A0A0D9SG52 128 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 LINC01619G3V211 115 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 ARNTLO00327 626 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 SIX3O95343 332 aaPredicted RBP2.9□□□□□ -1.94
LPP-220ENST00000617246 ADRA2CP18825 462 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 RPL27AP46776 148 aaKnown RBP2.9□□□□□ -1.94
LPP-220ENST00000617246 PCK2Q16822 640 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 LYRM7Q5U5X0 104 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 ACOT13Q9NPJ3 140 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 IDI2-AS1Q9NZ38 188 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 LOC102724200A0A096LPH7 203 aaPredicted RBP2.9□□□□□ -1.94
LPP-220ENST00000617246 A0A1W2PQF6 199 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 M0R1X1 148 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 SOD1P00441 154 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 RUNX1Q01196 453 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 TSPAN31Q12999 210 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 OR2T2Q6IF00 324 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 ZNF485Q8NCK3 441 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 ST6GALNAC5Q9BVH7 336 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 C11orf54Q9H0W9 315 aaPredicted RBP2.9□□□□□ -1.94
LPP-220ENST00000617246 PDFQ9HBH1 243 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 TMEM189A5PLL7 270 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 ARRDC5A6NEK1 342 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 HSD17B6O14756 317 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 CD160O95971 181 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 CD40P25942 277 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 OPRL1P41146 370 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 CNN1P51911 297 aaKnown RBP2.9□□□□□ -1.94
LPP-220ENST00000617246 LSM6P62312 80 aaKnown RBP2.9□□□□□ -1.94
LPP-220ENST00000617246 ACSM1Q08AH1 577 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 FUT5Q11128 374 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 C2orf76Q3KRA6 126 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 FAM159AQ6UWV7 190 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 JPT1Q9UK76 154 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 HAND1O96004 215 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 PRCDQ00LT1 54 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 ZNF415Q09FC8 603 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 IGFL3Q6UXB1 125 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 TCF23Q7RTU1 214 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 C1orf43Q9BWL3 253 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 CTRB1P17538 263 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 PRKACGP22612 351 aa2.9□□□□□ -1.94
LPP-220ENST00000617246 DLX6P56179 175 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms