RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 ADAM20O43506 726 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 DKK1O94907 266 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 CD63P08962 238 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 EPHA1P21709 976 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 GNRHRP30968 328 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 CEBPGP53567 150 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 RBM11P57052 281 aaKnown RBP13.44□□□□□ -0.26
GPN1-212ENST00000616939 CFHR1Q03591 330 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 ZFP36L1Q07352 338 aaKnown RBP13.44□□□□□ -0.26
GPN1-212ENST00000616939 CHAF1BQ13112 559 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 FAM27BQ5VT28 67 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 RHBDD2Q6NTF9 364 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 TBC1D26Q86UD7 250 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 DYRK2Q92630 601 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 RAB24Q969Q5 203 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 PSMG3Q9BT73 122 aaPredicted RBP13.44□□□□□ -0.26
GPN1-212ENST00000616939 SRD5A3Q9H8P0 318 aa13.44□□□□□ -0.26
GPN1-212ENST00000616939 IGKV1-12A0A0C4DH73 117 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 IGKV1D-12P01611 117 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 WNT2P09544 360 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 TCN2P20062 427 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 FUT3P21217 361 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 CD38P28907 300 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 FUT6P51993 359 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 OR1D5P58170 312 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 DEFB133Q30KQ1 61 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 Q6ZPA2 131 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 TGIF2LYQ8IUE0 185 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 Q8NFD4 153 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 OR5D13Q8NGL4 314 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 OR2V1Q8NHB1 315 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 THAP3Q8WTV1 239 aaPredicted RBP13.43□□□□□ -0.26
GPN1-212ENST00000616939 AGMATQ9BSE5 352 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 PLEK2Q9NYT0 353 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 SHISA7A6NL88 538 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 ZFAND5O76080 213 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 ZNF205O95201 554 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 TMEM50AO95807 157 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 GLI4P10075 376 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 OMGP23515 440 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 CD27P26842 260 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 ZNF124Q15973 351 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 PIGYQ3MUY2 71 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 CXorf66Q5JRM2 361 aaPredicted RBP13.43□□□□□ -0.26
GPN1-212ENST00000616939 ABLIM2Q6H8Q1 611 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 CPEB2Q7Z5Q1 589 aaKnown RBP13.43□□□□□ -0.26
GPN1-212ENST00000616939 C20orf196Q8IYI0 205 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 OR10G3Q8NGC4 313 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 CA5BP1Q8WTZ4 195 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 ST3GAL6Q9Y274 331 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 RNF115Q9Y4L5 304 aa13.43□□□□□ -0.26
GPN1-212ENST00000616939 SHANK1Q9Y566 2161 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 SYNGR3O43761 229 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 TUSC2O75896 110 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 NRASP01111 189 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 IFNA5P01569 189 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 OPN1LWP04000 364 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 CST2P09228 141 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 PAX9P55771 341 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 HNRNPKP61978 463 aaKnown RBP eCLIP13.42□□□□□ -0.26
GPN1-212ENST00000616939 RUNX1Q01196 453 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 SSX2Q16385 188 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 SHISA6Q6ZSJ9 500 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 SLC25A26Q70HW3 274 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 MAML2Q8IZL2 1156 aaPredicted RBP13.42□□□□□ -0.26
GPN1-212ENST00000616939 SUMF1Q8NBK3 374 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 OR10A7Q8NGE5 316 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 SSX3Q99909 188 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 NDUFAF3Q9BU61 184 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 GPR87Q9BY21 358 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 PARD6GQ9BYG4 376 aaPredicted RBP13.42□□□□□ -0.26
GPN1-212ENST00000616939 FGF21Q9NSA1 209 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 CA14Q9ULX7 337 aa13.42□□□□□ -0.26
GPN1-212ENST00000616939 TNRC6BQ9UPQ9 1833 aaKnown RBP13.42□□□□□ -0.26
GPN1-212ENST00000616939 H0Y980 276 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 CST7O76096 145 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 GCGP01275 180 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 IFNA1P01562 189 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 PGA5P0DJD9 388 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 RAB11AP62491 216 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 PDZD11Q5EBL8 140 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 DNASE2BQ8WZ79 361 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 SPACA9Q96E40 222 aaPredicted RBP13.41□□□□□ -0.26
GPN1-212ENST00000616939 ZNF845Q96IR2 970 aaPredicted RBP13.41□□□□□ -0.26
GPN1-212ENST00000616939 PRO1933Q9H354 126 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 MYOTQ9UBF9 498 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 FAM221AA4D161 298 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 A8MWP6 167 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 OR2J2O76002 312 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 NDUFB7P17568 137 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 ZNF154Q13106 437 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 ZNF787Q6DD87 383 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 UNQ6494/PRO21346Q6UXR6 183 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 GPR137CQ8N3F9 429 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 OR1P1Q8NH06 330 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 OR4X1Q8NH49 305 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 OR1F12Q8NHA8 337 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 RAB40CQ96S21 281 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 CABLES2Q9BTV7 478 aa13.41□□□□□ -0.26
GPN1-212ENST00000616939 TPSD1Q9BZJ3 242 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms