RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 BEND2Q8NDZ0 799 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 OR11L1Q8NGX0 322 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 TCFL5Q9UL49 500 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 HS3ST3B1Q9Y662 390 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 ASCC3Q8N3C0 2202 aaKnown RBP12.66□□□□□ -0.38
CTCFL-219ENST00000608720 C9J4A7 227 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 PPP1R2P9O14990 202 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 KLF7O75840 302 aaPredicted RBP12.66□□□□□ -0.38
CTCFL-219ENST00000608720 CDS2O95674 445 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 PTBP3O95758 552 aaKnown RBP12.66□□□□□ -0.38
CTCFL-219ENST00000608720 GLI4P10075 376 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 AADACP22760 399 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 SRD5A2P31213 254 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 FHITP49789 147 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 RBM11P57052 281 aaKnown RBP12.66□□□□□ -0.38
CTCFL-219ENST00000608720 B3GALT5-AS1P59052 145 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 HSD17B11Q8NBQ5 300 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 AGBL5Q8NDL9 886 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 C20orf24Q9BUV8 137 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 OR2H1Q9GZK4 316 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 SH3BGRL3Q9H299 93 aa12.66□□□□□ -0.38
CTCFL-219ENST00000608720 UNKLQ9H9P5 680 aaKnown RBP12.66□□□□□ -0.38
CTCFL-219ENST00000608720 MED12Q93074 2177 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 ZNF816-ZNF321PA0A0X1KG74 233 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 C3orf85A0A1B0GTC6 90 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 OR5H1A6NKK0 313 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 TCAPO15273 167 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 MPPED1O15442 326 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 PATE4P0C8F1 98 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 B4GALT1P15291 398 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 NTF4P34130 210 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 PRSS12P56730 875 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 PLCXD3Q63HM9 321 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 SLC35G3Q8N808 338 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 PIGCQ92535 297 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 CLDN23Q96B33 292 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 SGCZQ96LD1 299 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 FOXB1Q99853 325 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 WNT5BQ9H1J7 359 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 ZNF442Q9H7R0 627 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 ZNF716A6NP11 495 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 TRDCB7Z8K6 153 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 TGOLN2O43493 480 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 PPYP01298 95 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 EWSR1Q01844 656 aaKnown RBP eCLIP12.65□□□□□ -0.38
CTCFL-219ENST00000608720 ZNF92Q03936 586 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 OR2C3Q8N628 320 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 NAXEQ8NCW5 288 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 BOD1Q96IK1 185 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 NOL4LQ96MY1 436 aaPredicted RBP12.65□□□□□ -0.38
CTCFL-219ENST00000608720 TP53RKQ96S44 253 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 SIRT7Q9NRC8 400 aa12.65□□□□□ -0.38
CTCFL-219ENST00000608720 K7N7A8 449 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 GDF9O60383 454 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST1H2BKO60814 126 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 C1QL1O75973 258 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST1H2BJP06899 126 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST1H2BOP23527 126 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST1H2BBP33778 126 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST1H2BDP58876 126 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST1H2BCP62807 126 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 ZNF266Q14584 549 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST2H2BEQ16778 126 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-219ENST00000608720 RIPPLY2Q5TAB7 128 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 MEX3BQ6ZN04 569 aaKnown RBP12.64□□□□□ -0.39
CTCFL-219ENST00000608720 YRDCQ86U90 279 aaKnown RBP12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST1H2BHQ93079 126 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 MISP3Q96FF7 219 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 SPIN2AQ99865 258 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST1H2BNQ99877 126 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HIST1H2BMQ99879 126 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 SPIN2BQ9BPZ2 258 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 TMEM222Q9H0R3 208 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 RYDENQ9NUL5 291 aaKnown RBP12.64□□□□□ -0.39
CTCFL-219ENST00000608720 CEP192Q8TEP8 1941 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 SDK1Q7Z5N4 2213 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 LAMA1P25391 3075 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 NUTF2P61970 127 aaKnown RBP12.64□□□□□ -0.39
CTCFL-219ENST00000608720 HLA-BQ31612 363 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 TMEM182Q6ZP80 229 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-219ENST00000608720 DPPA2Q7Z7J5 298 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 OR2Y1Q8NGV0 311 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 OR14L1PQ8NHC6 308 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 FAM213BQ8TBF2 198 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 IFI44Q8TCB0 444 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 CD300LFQ8TDQ1 290 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 ALKBH3Q96Q83 286 aaPredicted RBP12.64□□□□□ -0.39
CTCFL-219ENST00000608720 MRPL37Q9BZE1 423 aaKnown RBP12.64□□□□□ -0.39
CTCFL-219ENST00000608720 C11orf1Q9H5F2 150 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 FBXO7Q9Y3I1 522 aa12.64□□□□□ -0.39
CTCFL-219ENST00000608720 NKX2-6A6NCS4 301 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A10PA6NDY2 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A18PA6NE21 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A16PA6NEW6 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A20PA6NIJ5 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A8PA6NJQ4 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A7PA6NKC0 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A22PA8MWA6 464 aa12.63□□□□□ -0.39
CTCFL-219ENST00000608720 FAM90A12PA8MX19 464 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms