RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 CPNE2Q96FN4 548 aaPredicted RBP12.9□□□□□ -0.34
SFXN2-208ENST00000602660 DERL3Q96Q80 235 aa12.9□□□□□ -0.34
SFXN2-208ENST00000602660 OR14A2Q96R54 314 aa12.9□□□□□ -0.34
SFXN2-208ENST00000602660 NR1H4Q96RI1 486 aaPredicted RBP12.9□□□□□ -0.34
SFXN2-208ENST00000602660 CITED1Q99966 193 aa12.9□□□□□ -0.34
SFXN2-208ENST00000602660 CCDC90BQ9GZT6 254 aa12.9□□□□□ -0.34
SFXN2-208ENST00000602660 FAM192AQ9GZU8 254 aa12.9□□□□□ -0.34
SFXN2-208ENST00000602660 ZNF696Q9H7X3 374 aa12.9□□□□□ -0.34
SFXN2-208ENST00000602660 IL36GQ9NZH8 169 aa12.9□□□□□ -0.34
SFXN2-208ENST00000602660 RNF114Q9Y508 228 aa12.9□□□□□ -0.34
SFXN2-208ENST00000602660 NOTCH1P46531 2555 aa12.9□□□□□ -0.34
SFXN2-208ENST00000602660 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 MAGEB3O15480 346 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 CGB3P0DN86 165 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 CGB7P0DN87 165 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 JUNBP17275 347 aaPredicted RBP12.89□□□□□ -0.35
SFXN2-208ENST00000602660 CELP19835 753 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 ZNF93P35789 620 aaPredicted RBP12.89□□□□□ -0.35
SFXN2-208ENST00000602660 TGFBR2P37173 567 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 LGALS4P56470 323 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 TAS2R43P59537 309 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 GABARAPL2P60520 117 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 PPP3R1P63098 170 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 C17orf58Q2M2W7 97 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 KRBOX4Q5JUW0 171 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 PRAMEF5Q5TYX0 476 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 RNLSQ5VYX0 342 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 HEPN1Q6WQI6 88 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 OR4P4Q8NGL7 312 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 CDCA4Q9BXL8 241 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 TMEM133Q9H2Q1 129 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 DUSP21Q9H596 190 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 TAS2R3Q9NYW6 316 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 LSM2Q9Y333 95 aaKnown RBP12.89□□□□□ -0.35
SFXN2-208ENST00000602660 LRRC42Q9Y546 428 aa12.89□□□□□ -0.35
SFXN2-208ENST00000602660 TRGV10A0A0A0MS01 117 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 A0A1W2PP11 408 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 A0A1W2PPK0 400 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 HSPB6O14558 160 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 HTR3BO95264 441 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 CDK2P24941 298 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 RAB13P51153 203 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 RBM11P57052 281 aaKnown RBP12.88□□□□□ -0.35
SFXN2-208ENST00000602660 PAX5Q02548 391 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 IRF3Q14653 427 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 RSU1Q15404 277 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 SSX2Q16385 188 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 PLA1AQ53H76 456 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 NHLRC3Q5JS37 347 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 SLC35E4Q6ICL7 350 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 CCBE1Q6UXH8 406 aaPredicted RBP12.88□□□□□ -0.35
SFXN2-208ENST00000602660 TRAPPC6BQ86SZ2 158 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 PLPPR1Q8TBJ4 325 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 MALSU1Q96EH3 234 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 OR5M11Q96RB7 305 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 CLEC7AQ9BXN2 247 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 ING3Q9NXR8 418 aa12.88□□□□□ -0.35
SFXN2-208ENST00000602660 FUOMA2VDF0 154 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 IGLV1-47P01700 117 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 CD34P28906 385 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 GP2P55259 537 aaKnown RBP12.87□□□□□ -0.35
SFXN2-208ENST00000602660 BDH1Q02338 343 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 INSL4Q14641 139 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 MED22Q15528 200 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 PAN3Q58A45 887 aaKnown RBP12.87□□□□□ -0.35
SFXN2-208ENST00000602660 RSBN1Q5VWQ0 802 aaPredicted RBP12.87□□□□□ -0.35
SFXN2-208ENST00000602660 PRSS48Q7RTY5 328 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 OR13A1Q8NGR1 328 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 FOXRED1Q96CU9 486 aaPredicted RBP12.87□□□□□ -0.35
SFXN2-208ENST00000602660 GAL3ST2Q9H3Q3 398 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 NCOR1P1Q9H4R4 102 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 IFT22Q9H7X7 185 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 KIF25Q9UIL4 384 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 FOXJ3Q9UPW0 622 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 ST3GAL6Q9Y274 331 aa12.87□□□□□ -0.35
SFXN2-208ENST00000602660 A0A087X0M5 115 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 A0A1B0GX30 115 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 FAM172BPA6NC97 362 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 SERPINA2P20848 420 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 DYNLT3P51808 116 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 DYNC1I2Q13409 638 aaKnown RBP12.86□□□□□ -0.35
SFXN2-208ENST00000602660 MINOS1Q5TGZ0 78 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 METTL9Q9H1A3 318 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 ZNF286AQ9HBT8 521 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 FBLN5Q9UBX5 448 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 ING4Q9UNL4 249 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 TCF19Q9Y242 345 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 SIGLEC9Q9Y336 463 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 MINOS1-NBL1R4GNA1 71 aa12.86□□□□□ -0.35
SFXN2-208ENST00000602660 A6NDX4 124 aa12.85□□□□□ -0.35
SFXN2-208ENST00000602660 ZNF729A6NN14 1252 aaPredicted RBP12.85□□□□□ -0.35
SFXN2-208ENST00000602660 GEMIN2O14893 280 aaKnown RBP12.85□□□□□ -0.35
SFXN2-208ENST00000602660 SPHARQ15513 63 aa12.85□□□□□ -0.35
SFXN2-208ENST00000602660 TBCEQ15813 527 aaPredicted RBP12.85□□□□□ -0.35
SFXN2-208ENST00000602660 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
SFXN2-208ENST00000602660 SLC22A6Q4U2R8 563 aa12.85□□□□□ -0.35
SFXN2-208ENST00000602660 FAM27D1Q5T7N8 215 aa12.85□□□□□ -0.35
SFXN2-208ENST00000602660 BRICD5Q6PL45 260 aa12.85□□□□□ -0.35
SFXN2-208ENST00000602660 UNQ9370/PRO34162Q6UXP9 181 aa12.85□□□□□ -0.35
SFXN2-208ENST00000602660 ABHD12Q8N2K0 398 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms