RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 PCED1AQ9H1Q7 454 aa15.86■□□□□ 0.13
UPF1-210ENST00000600689 SLC7A10Q9NS82 523 aa15.86■□□□□ 0.13
UPF1-210ENST00000600689 K7ESF4 209 aa15.85■□□□□ 0.13
UPF1-210ENST00000600689 CD55P08174 381 aa15.85■□□□□ 0.13
UPF1-210ENST00000600689 HLA-DRB3P79483 266 aa15.85■□□□□ 0.13
UPF1-210ENST00000600689 ENDOGQ14249 297 aaKnown RBP15.85■□□□□ 0.13
UPF1-210ENST00000600689 PP6455Q8WZ26 134 aa15.85■□□□□ 0.13
UPF1-210ENST00000600689 VSIRQ9H7M9 311 aa15.85■□□□□ 0.13
UPF1-210ENST00000600689 KIAA1456Q9P272 454 aa15.85■□□□□ 0.13
UPF1-210ENST00000600689 A0A1W2PNV4 684 aa15.85■□□□□ 0.13
UPF1-210ENST00000600689 MPPED1O15442 326 aa15.85■□□□□ 0.13
UPF1-210ENST00000600689 RRP8O43159 456 aaKnown RBP15.85■□□□□ 0.13
UPF1-210ENST00000600689 Q3ZCU0 254 aa15.85■□□□□ 0.13
UPF1-210ENST00000600689 OR4D5Q8NGN0 318 aa15.85■□□□□ 0.13
UPF1-210ENST00000600689 THOC3Q96J01 351 aaKnown RBP15.85■□□□□ 0.13
UPF1-210ENST00000600689 PPYP01298 95 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 IL2RGP31785 369 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 APLNRP35414 380 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 GLIPR1P48060 266 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 RAET1LQ5VY80 246 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 Q6ZPA2 131 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 RNASE11Q8TAA1 199 aaKnown RBP15.84■□□□□ 0.13
UPF1-210ENST00000600689 MRGPRX4Q96LA9 322 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 ALDH3B1P43353 468 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 CXCL12P48061 93 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 ARL6IP1Q15041 203 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 SLC16A14Q7RTX9 510 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 ANKRD37Q7Z713 158 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 CABLES2Q9BTV7 478 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 PLEKHF2Q9H8W4 249 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 ESPL1Q14674 2120 aa15.84■□□□□ 0.13
UPF1-210ENST00000600689 NPIPA2E9PIF3 369 aa15.83■□□□□ 0.13
UPF1-210ENST00000600689 NPIPA3F8WFD2 350 aa15.83■□□□□ 0.13
UPF1-210ENST00000600689 IFNL4K9M1U5 179 aa15.83■□□□□ 0.13
UPF1-210ENST00000600689 CELA2AP08217 269 aa15.83■□□□□ 0.13
UPF1-210ENST00000600689 G0S2P27469 103 aa15.83■□□□□ 0.13
UPF1-210ENST00000600689 NPBWR2P48146 333 aa15.83■□□□□ 0.13
UPF1-210ENST00000600689 GUSBP11Q6P575 273 aa15.83■□□□□ 0.13
UPF1-210ENST00000600689 C1orf87Q8N0U7 546 aa15.83■□□□□ 0.13
UPF1-210ENST00000600689 ULBP2Q9BZM5 246 aa15.83■□□□□ 0.13
UPF1-210ENST00000600689 CYTIPO60759 359 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 REC114Q7Z4M0 266 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 TGIF2LXQ8IUE1 241 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 GAPTQ8N292 157 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 OR51H1Q8NH63 302 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 CLDND2Q8NHS1 167 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 HIST1H2BLQ99880 126 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 TMED3Q9Y3Q3 217 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 ADAMTS20P59510 1910 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 ST8SIA5O15466 376 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 PTBP3O95758 552 aaKnown RBP15.83■□□□□ 0.12
UPF1-210ENST00000600689 CCNOP22674 350 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 ELLP55199 621 aaPredicted RBP15.83■□□□□ 0.12
UPF1-210ENST00000600689 CASP6P55212 293 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 ZNF468Q5VIY5 522 aaPredicted RBP15.83■□□□□ 0.12
UPF1-210ENST00000600689 IL22RA1Q8N6P7 574 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 CCDC71LQ8N9Z2 235 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 AKIRIN1Q9H9L7 192 aaPredicted RBP15.83■□□□□ 0.12
UPF1-210ENST00000600689 V9GYS6 101 aa15.83■□□□□ 0.12
UPF1-210ENST00000600689 CEBPZOSA8MTT3 80 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 IAPPP10997 89 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 ERVS71-1P61550 626 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 ADIRFQ15847 76 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 OSR2Q8N2R0 312 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 UBALD1Q8TB05 177 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 SLC25A31Q9H0C2 315 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 PISDQ9UG56 409 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 NPIPB13A6NJU9 1138 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 TRDCB7Z8K6 153 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 NPIPB4C9JG80 1138 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 GDF9O60383 454 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 IGHV3-9P01782 118 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 MMP7P09237 267 aaPredicted RBP15.82■□□□□ 0.12
UPF1-210ENST00000600689 SCTP09683 121 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 LMO1P25800 156 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 SSTP61278 116 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 MALLQ13021 153 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 LURAP1Q96LR2 239 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 OR6C1Q96RD1 312 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 PRO3102Q9H379 93 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 WASF3Q9UPY6 502 aa15.82■□□□□ 0.12
UPF1-210ENST00000600689 B4GALT1P15291 398 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 PKIAP61925 76 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 PLCXD3Q63HM9 321 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 WDR74Q6RFH5 385 aaPredicted RBP15.81■□□□□ 0.12
UPF1-210ENST00000600689 ZNF818PQ6ZRF7 136 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 BEND4Q6ZU67 534 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 MOB3AQ96BX8 217 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 ALKBH3Q96Q83 286 aaPredicted RBP15.81■□□□□ 0.12
UPF1-210ENST00000600689 CCL28Q9NRJ3 127 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 COL5A1P20908 1838 aaPredicted RBP15.81■□□□□ 0.12
UPF1-210ENST00000600689 SLC31A2O15432 143 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 DHHO43323 396 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 RTL6Q6ICC9 239 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 SLC25A26Q70HW3 274 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 ZNF100Q8IYN0 542 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 GPR137CQ8N3F9 429 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 SPTSSAQ969W0 71 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 PLA2G3Q9NZ20 509 aa15.81■□□□□ 0.12
UPF1-210ENST00000600689 SEMA5BQ9P283 1151 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms