RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 C16orf87Q6PH81 154 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 GLIPR1L1Q6UWM5 242 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 ZNF367Q7RTV3 350 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 CEACAM19Q7Z692 300 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 LHFPL4Q7Z7J7 247 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 DYNAPQ8N1N2 210 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 OR11H6Q8NGC7 330 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 PHYHIPQ92561 330 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 TMEM203Q969S6 136 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 HEXA-AS1Q9H8Q6 139 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 TNFRSF19Q9NS68 423 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 RCC2Q9P258 522 aaKnown RBP12.79□□□□□ -0.36
RPS28-203ENST00000600659 BLOC1S6Q9UL45 172 aa12.79□□□□□ -0.36
RPS28-203ENST00000600659 FABP5Q01469 135 aa12.78□□□□□ -0.36
RPS28-203ENST00000600659 C17orf58Q2M2W7 97 aa12.78□□□□□ -0.36
RPS28-203ENST00000600659 PAN3Q58A45 887 aaKnown RBP12.78□□□□□ -0.36
RPS28-203ENST00000600659 AWAT1Q58HT5 328 aa12.78□□□□□ -0.36
RPS28-203ENST00000600659 KRBOX4Q5JUW0 171 aa12.78□□□□□ -0.36
RPS28-203ENST00000600659 SUMF2Q8NBJ7 301 aa12.78□□□□□ -0.36
RPS28-203ENST00000600659 BEND2Q8NDZ0 799 aa12.78□□□□□ -0.36
RPS28-203ENST00000600659 TMEM104Q8NE00 496 aa12.78□□□□□ -0.36
RPS28-203ENST00000600659 UQCC2Q9BRT2 126 aa12.78□□□□□ -0.36
RPS28-203ENST00000600659 MEGF9Q9H1U4 602 aa12.78□□□□□ -0.36
RPS28-203ENST00000600659 SESN1Q9Y6P5 492 aa12.78□□□□□ -0.36
RPS28-203ENST00000600659 hCG_1809904A0A1W2PP81 198 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 A0A1W2PPE2 198 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 A0A1W2PR64 198 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 A0A1W2PRV1 198 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 FAM181BA6NEQ2 426 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 ZNF780AO75290 641 aaPredicted RBP12.77□□□□□ -0.37
RPS28-203ENST00000600659 OR7C1O76099 320 aaPredicted RBP12.77□□□□□ -0.37
RPS28-203ENST00000600659 SRMP19623 302 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 MPV17LQ2QL34 196 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 HSD17B12Q53GQ0 312 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 C1orf100Q5SVJ3 147 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 PRAMEF5Q5TYX0 476 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 AWAT2Q6E213 333 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 SIGIRRQ6IA17 410 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 HEPN1Q6WQI6 88 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 LINC00596Q86U02 117 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 OR13A1Q8NGR1 328 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 GCDHQ92947 438 aaPredicted RBP12.77□□□□□ -0.37
RPS28-203ENST00000600659 Q96M66 194 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 DPCDQ9BVM2 203 aaPredicted RBP12.77□□□□□ -0.37
RPS28-203ENST00000600659 KCNK15Q9H427 330 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 NCOR1P1Q9H4R4 102 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 ING3Q9NXR8 418 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 TAS2R3Q9NYW6 316 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 KIF25Q9UIL4 384 aa12.77□□□□□ -0.37
RPS28-203ENST00000600659 TRGV10A0A0A0MS01 117 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 IGHV2-26A0A0B4J1V2 119 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 SHISA3A0PJX4 238 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 GPR137BO60478 399 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 MRPS14O60783 128 aaKnown RBP12.76□□□□□ -0.37
RPS28-203ENST00000600659 CSTBP04080 98 aaKnown RBP12.76□□□□□ -0.37
RPS28-203ENST00000600659 GTF2F2P13984 249 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 GABRA5P31644 462 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 SPARTQ8N0X7 666 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 OR13D1Q8NGV5 346 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 PIFOQ8TCI5 191 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 TMEM133Q9H2Q1 129 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 BANF2Q9H503 90 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 Q9H521 79 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 LINC00574Q9H8X3 128 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 TCF7L1Q9HCS4 588 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 C1RLQ9NZP8 487 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 FAM96BQ9Y3D0 163 aa12.76□□□□□ -0.37
RPS28-203ENST00000600659 A0A087X0M5 115 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 A0A1B0GX30 115 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 FUOMA2VDF0 154 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 MGMTP16455 207 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 OMGP23515 440 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 CDK2P24941 298 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 CD34P28906 385 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 KCNJ3P48549 501 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 QRFPP83859 136 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 GPR176Q14439 515 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 TRAM1Q15629 374 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 UBE2UQ5VVX9 321 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 BRICD5Q6PL45 260 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 CD200R1LQ6Q8B3 271 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 TRAPPC6BQ86SZ2 158 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 OR4P4Q8NGL7 312 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 DYRK2Q92630 601 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 MRPS24Q96EL2 167 aaKnown RBP12.75□□□□□ -0.37
RPS28-203ENST00000600659 S100A13Q99584 98 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 YTHDF1Q9BYJ9 559 aaKnown RBP12.75□□□□□ -0.37
RPS28-203ENST00000600659 NDUFB11Q9NX14 153 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 VPREB3Q9UKI3 123 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 TBL2Q9Y4P3 447 aaKnown RBP12.75□□□□□ -0.37
RPS28-203ENST00000600659 TRRAPQ9Y4A5 3859 aa12.75□□□□□ -0.37
RPS28-203ENST00000600659 TRAV39A0A0B4J263 110 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 ZNF729A6NN14 1252 aaPredicted RBP12.74□□□□□ -0.37
RPS28-203ENST00000600659 NPIPB11E5RHQ5 1161 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 SLC22A1O15245 554 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 IGLV1-47P01700 117 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 ARG1P05089 322 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 VSIG8P0DPA2 414 aa12.74□□□□□ -0.37
RPS28-203ENST00000600659 PSMA1P25786 263 aaKnown RBP12.74□□□□□ -0.37
RPS28-203ENST00000600659 CFPP27918 469 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms