RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CEBPDP49716 269 aaPredicted RBP10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 DSCR9P59020 149 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 TAS2R20P59543 309 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 ZNF45Q02386 682 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 COL10A1Q03692 680 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 MADCAM1Q13477 382 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 RBM39Q14498 530 aaKnown RBP10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 MOGAT2Q3SYC2 334 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 METAP1DQ6UB28 335 aaPredicted RBP10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 Q6ZTK2 550 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 SLC36A1Q7Z2H8 476 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 CCDC190Q86UF4 302 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 SPICQ8N5J4 248 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 ANGPTL6Q8NI99 470 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 PPP1R35Q8TAP8 253 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 FAM168AQ92567 244 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 DPCDQ9BVM2 203 aaPredicted RBP10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 PECRQ9BY49 303 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 WDR12Q9GZL7 423 aaKnown RBP10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 DNTTIP1Q9H147 329 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 ZNF665Q9H7R5 613 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 SEBOXQ9HB31 216 aaPredicted RBP10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 HSF4Q9ULV5 492 aa10.04□□□□□ -0.8
SHKBP1-213ENST00000597325 SERPINE3A8MV23 424 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 NDUFS8O00217 210 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 SLC33A1O00400 549 aaPredicted RBP10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 TPPPO94811 219 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 TFF1P04155 84 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 GNB3P16520 340 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 PTBP1P26599 531 aaKnown RBP eCLIP10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 ETV6P41212 452 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 GNG2P59768 71 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 IL13RA1P78552 427 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 LSAMPQ13449 338 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 ARFRP1Q13795 201 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 ZNF846Q147U1 533 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 CDNFQ49AH0 187 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 TMEM155Q4W5P6 130 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 MIDNQ504T8 468 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 PYDC2Q56P42 97 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 CYB5R2Q6BCY4 276 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 PYHIN1Q6K0P9 492 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 Q6P435 159 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 DCDC5Q6ZRR9 648 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 NLRC3Q7RTR2 1065 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 C6orf201Q7Z4U5 140 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 SNX29P2Q8IUI4 249 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 ZNF561Q8N587 486 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 CD177Q8N6Q3 437 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 C3orf56Q8N813 242 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 SUMF2Q8NBJ7 301 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 MED30Q96HR3 178 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 ARHGAP5-AS1Q96IT6 56 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 TMEM246Q9BRR3 403 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 AKIP1Q9NQ31 210 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 RCC2Q9P258 522 aaKnown RBP10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 ZNF222Q9UK12 451 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 PCDHB10Q9UN67 800 aa10.03□□□□□ -0.8
SHKBP1-213ENST00000597325 TRAV24A0A0B4J272 114 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 A0A0G2JMP0 313 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 A0A0X1KG70 313 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 UBE2QL1A1L167 161 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 TMEM235A6NFC5 223 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 FOXI3A8MTJ6 420 aaPredicted RBP10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 MFNGO00587 321 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 TMPRSS2O15393 492 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 ADAM20O43506 726 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 GLAP06280 429 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 CD3GP09693 182 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 RPS2P15880 293 aaKnown RBP10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 LMO1P25800 156 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 GIFP27352 417 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 KCNJ3P48549 501 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 GRK1Q15835 563 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 PLAC9Q5JTB6 97 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 SIGIRRQ6IA17 410 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 FAM216BQ8N7L0 139 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 TMEM185AQ8NFB2 350 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 OR4M2Q8NGB6 313 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 SDSLQ96GA7 329 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 GAFA1Q96PS6 74 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 CCL13Q99616 98 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 PPA2Q9H2U2 334 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 AUNIPQ9H7T9 357 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 ZMAT3Q9HA38 289 aaKnown RBP10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 CHMP1AQ9HD42 196 aaPredicted RBP10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 ETAA1Q9NY74 926 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 ZNF581Q9P0T4 197 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 V9GYH0 126 aa10.02□□□□□ -0.81
SHKBP1-213ENST00000597325 SIGLEC5O15389 551 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 NDUFB3O43676 98 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 PRSS3P35030 304 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 TMEM50BP56557 158 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 MRPS10P82664 201 aaKnown RBP10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 ATXN7L3Q14CW9 347 aaPredicted RBP10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 PNLIPRP3Q17RR3 467 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 ZNF260Q3ZCT1 412 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 LRRC10Q5BKY1 277 aa10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 ATPAF1Q5TC12 328 aaPredicted RBP10.01□□□□□ -0.81
SHKBP1-213ENST00000597325 HACD4Q5VWC8 232 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms