RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 KRBOX4Q5JUW0 171 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 RBM48Q5RL73 367 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 UTF1Q5T230 341 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 PRAMEF5Q5TYX0 476 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 RSBN1Q5VWQ0 802 aaPredicted RBP8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 TRAPPC6BQ86SZ2 158 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 LRRTM1Q86UE6 522 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 CDH26Q8IXH8 852 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 JAGN1Q8N5M9 183 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 MS4A15Q8N5U1 240 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 DYRK2Q92630 601 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 CYYR1Q96J86 154 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 MEGF9Q9H1U4 602 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 IFT22Q9H7X7 185 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 ING3Q9NXR8 418 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 C1RLQ9NZP8 487 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 VPREB3Q9UKI3 123 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 MRPS28Q9Y2Q9 187 aaKnown RBP8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 SESN1Q9Y6P5 492 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 CMYA5Q8N3K9 4069 aa8.91□□□□□ -0.98
SHKBP1-206ENST00000595523 TRGV10A0A0A0MS01 117 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 IGHV2-26A0A0B4J1V2 119 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 H3BUX3 64 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 PAHP00439 452 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 ARG1P05089 322 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 HSMCR30P0CW71 290 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 MDKP21741 143 aaPredicted RBP8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 MLLT11Q13015 90 aaPredicted RBP8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 TBCEQ15813 527 aaPredicted RBP8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 C17orf58Q2M2W7 97 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 GLIPR1L1Q6UWM5 242 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 HEPN1Q6WQI6 88 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 TMEM91Q6ZNR0 172 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 NKAIN3Q8N8D7 197 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 SUMF2Q8NBJ7 301 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 TMEM104Q8NE00 496 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 OR13A1Q8NGR1 328 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 OR13D1Q8NGV5 346 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 PIFOQ8TCI5 191 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 THRSPQ92748 146 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 UFD1Q92890 307 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 TMEM203Q969S6 136 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 DPCDQ9BVM2 203 aaPredicted RBP8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 CCDC90BQ9GZT6 254 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 TMEM133Q9H2Q1 129 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 DPAGT1Q9H3H5 408 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 ISYNA1Q9NPH2 558 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 TAS2R3Q9NYW6 316 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 KIF25Q9UIL4 384 aa8.9□□□□□ -0.98
SHKBP1-206ENST00000595523 FUOMA2VDF0 154 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 FAM172BPA6NC97 362 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 DENRO43583 198 aaKnown RBP8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 ZNF780AO75290 641 aaPredicted RBP8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 OR7C1O76099 320 aaPredicted RBP8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 NDUFA7O95182 113 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 CSTBP04080 98 aaKnown RBP8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 UCHL1P09936 223 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 CD37P11049 281 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 GTF2F2P13984 249 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 CPEP16870 476 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 JUNBP17275 347 aaPredicted RBP8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 CDK2P24941 298 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 RAG2P55895 527 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 RPL15P61313 204 aaKnown RBP8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 SSX1Q16384 188 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 MPV17LQ2QL34 196 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 CEACAM19Q7Z692 300 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 LINC00596Q86U02 117 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 C3orf56Q8N813 242 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 PHYHIPQ92561 330 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 S100A13Q99584 98 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 GFI1Q99684 422 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 MGLLQ99685 303 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 SSX3Q99909 188 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 UQCC2Q9BRT2 126 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 GAL3ST2Q9H3Q3 398 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 NCOR1P1Q9H4R4 102 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 ACOT13Q9NPJ3 140 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 RCC2Q9P258 522 aaKnown RBP8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 RRP15Q9Y3B9 282 aaKnown RBP8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 TBL2Q9Y4P3 447 aaKnown RBP8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 MMP24Q9Y5R2 645 aa8.89□□□□□ -0.99
SHKBP1-206ENST00000595523 A0A087X0M5 115 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 TRAV39A0A0B4J263 110 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 KBTBD11-OT1A0A1B0GTJ5 212 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 A0A1B0GX30 115 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 ZNF729A6NN14 1252 aaPredicted RBP8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 VGLL3A8MV65 326 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 MGMTP16455 207 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 SRMP19623 302 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 CD34P28906 385 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 KCNJ3P48549 501 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 GABARAPL2P60520 117 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 FABP5Q01469 135 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 EMX1Q04741 257 aaPredicted RBP8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 GPR176Q14439 515 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 AANATQ16613 207 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 LRRC75BQ2VPJ9 315 aa8.88□□□□□ -0.99
SHKBP1-206ENST00000595523 HSD17B12Q53GQ0 312 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms