RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 PLA2G10O15496 165 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 RBBP9O75884 186 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 ECDO95905 644 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-208ENST00000588667 LPLP06858 475 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 ZFP36P26651 326 aaKnown RBP16.75■□□□□ 0.27
ATG4D-208ENST00000588667 GNB2P62879 340 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 SSBP1Q04837 148 aaKnown RBP16.75■□□□□ 0.27
ATG4D-208ENST00000588667 ZNF260Q3ZCT1 412 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 CDNFQ49AH0 187 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 ACP7Q6ZNF0 438 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 Q6ZTK2 550 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 Q8NFD4 153 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 C11orf54Q9H0W9 315 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-208ENST00000588667 HES4Q9HCC6 221 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 CLN8Q9UBY8 286 aa16.75■□□□□ 0.27
ATG4D-208ENST00000588667 MEIOCA2RUB1 952 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 OR2AT4A6NND4 320 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 CENPXA8MT69 81 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 KIAA1324LA8MWY0 1029 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-208ENST00000588667 INAFM1C9JVW0 142 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 TMPRSS2O15393 492 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 SOCS1O15524 211 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 PHF1O43189 567 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-208ENST00000588667 LYRM1O43325 122 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 NXPH2O95156 264 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 SFTPBP07988 381 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 MELTFP08582 738 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 GSTP1P09211 210 aaKnown RBP16.74■□□□□ 0.27
ATG4D-208ENST00000588667 HIST1H1DP16402 221 aaKnown RBP16.74■□□□□ 0.27
ATG4D-208ENST00000588667 NPY4RP50391 375 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 ERVK11-1P61568 191 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 ATPAF1Q5TC12 328 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-208ENST00000588667 ELP2Q6IA86 826 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 ZNF841Q6ZN19 808 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 Q6ZNX1 250 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 SLC36A1Q7Z2H8 476 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 ANGPTL6Q8NI99 470 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 SLAMF9Q96A28 289 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 ZMAT3Q9HA38 289 aaKnown RBP16.74■□□□□ 0.27
ATG4D-208ENST00000588667 RHOFQ9HBH0 211 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 TAS2R8Q9NYW2 309 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 MTCH1Q9NZJ7 389 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 KLK11Q9UBX7 282 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 MTFP1Q9UDX5 166 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 C2CD3Q4AC94 2353 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 PPIAL4CA0A0B4J2A2 164 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 TMEM235A6NFC5 223 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 NKX6-3A6NJ46 265 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 BLVRBP30043 206 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-208ENST00000588667 ACTBP60709 375 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 ACTG1P63261 375 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 DYRK1AQ13627 763 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 WDR25Q64LD2 544 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-208ENST00000588667 GDPD3Q7L5L3 318 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 OR5T2Q8NGG2 359 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 GPX8Q8TED1 209 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 CCL13Q99616 98 aa16.74■□□□□ 0.27
ATG4D-208ENST00000588667 NAV3Q8IVL0 2385 aa16.73■□□□□ 0.27
ATG4D-208ENST00000588667 GNB3P16520 340 aa16.73■□□□□ 0.27
ATG4D-208ENST00000588667 AMY2BP19961 511 aa16.73■□□□□ 0.27
ATG4D-208ENST00000588667 BCL3P20749 454 aa16.73■□□□□ 0.27
ATG4D-208ENST00000588667 GATA3P23771 443 aa16.73■□□□□ 0.27
ATG4D-208ENST00000588667 GABRR1P24046 479 aa16.73■□□□□ 0.27
ATG4D-208ENST00000588667 Q8IYB0 196 aa16.73■□□□□ 0.27
ATG4D-208ENST00000588667 C7orf50Q9BRJ6 194 aaKnown RBP16.73■□□□□ 0.27
ATG4D-208ENST00000588667 ST3GAL6Q9Y274 331 aa16.73■□□□□ 0.27
ATG4D-208ENST00000588667 IGKV1D-17A0A075B6S4 117 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 FOXI3A8MTJ6 420 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-208ENST00000588667 PSG2P11465 335 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 NPBWR2P48146 333 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 TMEM50BP56557 158 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 RBM11P57052 281 aaKnown RBP16.72■□□□□ 0.27
ATG4D-208ENST00000588667 FGF12P61328 243 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 GUCA2AQ02747 115 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 KLF9Q13886 244 aaPredicted RBP16.72■□□□□ 0.27
ATG4D-208ENST00000588667 PNLIPRP3Q17RR3 467 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 PLAC9Q5JTB6 97 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 ZNF788Q6ZQV5 615 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 NRARPQ7Z6K4 114 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 BATF2Q8N1L9 274 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 FAM216BQ8N7L0 139 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 ENKURQ8TC29 256 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 DEDD2Q8WXF8 326 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATG4D-208ENST00000588667 RBFOX1Q9NWB1 397 aaKnown RBP16.72■□□□□ 0.27
ATG4D-208ENST00000588667 ZNF222Q9UK12 451 aa16.72■□□□□ 0.27
ATG4D-208ENST00000588667 A0A1B0GVG6 124 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 ANKRD20A5PA0PJZ0 165 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A10PA6NDY2 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A18PA6NE21 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A16PA6NEW6 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A20PA6NIJ5 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A8PA6NJQ4 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A7PA6NKC0 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A22PA8MWA6 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A12PA8MX19 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A5PA8MXJ8 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 FAM90A23PA8MXZ1 464 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 MFNGO00587 321 aa16.71■□□□□ 0.27
ATG4D-208ENST00000588667 CSF1P09603 554 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms