RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 A0A1W2PRF3 423 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 A0A1W2PRM7 423 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 C17orf98A8MV24 154 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 PIN1P1O15428 100 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 RBP4P02753 201 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 CSF1P09603 554 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 P2RX3P56373 397 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 MLLT11Q13015 90 aaPredicted RBP13.02□□□□□ -0.33
VAPA-204ENST00000577901 KLRD1Q13241 179 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 TPBGQ13641 420 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 TRAM1Q15629 374 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 LIPKQ5VXJ0 399 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 UNQ9370/PRO34162Q6UXP9 181 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 CEACAM19Q7Z692 300 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 OSR2Q8N2R0 312 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 C11orf42Q8N5U0 333 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 NKAIN3Q8N8D7 197 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 OR10K1Q8NGX5 313 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 NKX3-1Q99801 234 aaPredicted RBP13.02□□□□□ -0.33
VAPA-204ENST00000577901 LINC00312Q9Y6C7 94 aa13.02□□□□□ -0.33
VAPA-204ENST00000577901 MEIOCA2RUB1 952 aa13.01□□□□□ -0.33
VAPA-204ENST00000577901 MAGEA13PA6NCF6 341 aa13.01□□□□□ -0.33
VAPA-204ENST00000577901 SLC33A1O00400 549 aaPredicted RBP13.01□□□□□ -0.33
VAPA-204ENST00000577901 MRPS14O60783 128 aaKnown RBP13.01□□□□□ -0.33
VAPA-204ENST00000577901 PAHP00439 452 aa13.01□□□□□ -0.33
VAPA-204ENST00000577901 CSN2P05814 226 aa13.01□□□□□ -0.33
VAPA-204ENST00000577901 GTF2F2P13984 249 aa13.01□□□□□ -0.33
VAPA-204ENST00000577901 PSMA1P25786 263 aaKnown RBP13.01□□□□□ -0.33
VAPA-204ENST00000577901 TRAPPC6BQ86SZ2 158 aa13.01□□□□□ -0.33
VAPA-204ENST00000577901 TPRX1Q8N7U7 411 aa13.01□□□□□ -0.33
VAPA-204ENST00000577901 MGLLQ99685 303 aa13.01□□□□□ -0.33
VAPA-204ENST00000577901 PPA2Q9H2U2 334 aa13.01□□□□□ -0.33
VAPA-204ENST00000577901 ST3GAL6Q9Y274 331 aa13.01□□□□□ -0.33
VAPA-204ENST00000577901 UBE2J1Q9Y385 318 aaPredicted RBP13.01□□□□□ -0.33
VAPA-204ENST00000577901 TRGV10A0A0A0MS01 117 aa13□□□□□ -0.33
VAPA-204ENST00000577901 CPEP16870 476 aa13□□□□□ -0.33
VAPA-204ENST00000577901 SERPINA2P20848 420 aa13□□□□□ -0.33
VAPA-204ENST00000577901 SAA4P35542 130 aa13□□□□□ -0.33
VAPA-204ENST00000577901 MAP2K4P45985 399 aa13□□□□□ -0.33
VAPA-204ENST00000577901 DLX6P56179 175 aa13□□□□□ -0.33
VAPA-204ENST00000577901 GABARAPL2P60520 117 aa13□□□□□ -0.33
VAPA-204ENST00000577901 AESQ08117 197 aa13□□□□□ -0.33
VAPA-204ENST00000577901 INSL4Q14641 139 aa13□□□□□ -0.33
VAPA-204ENST00000577901 TBCEQ15813 527 aaPredicted RBP13□□□□□ -0.33
VAPA-204ENST00000577901 PIGYQ3MUY2 71 aa13□□□□□ -0.33
VAPA-204ENST00000577901 SLC22A6Q4U2R8 563 aa13□□□□□ -0.33
VAPA-204ENST00000577901 NHLRC3Q5JS37 347 aa13□□□□□ -0.33
VAPA-204ENST00000577901 KRBOX4Q5JUW0 171 aa13□□□□□ -0.33
VAPA-204ENST00000577901 SLC35E4Q6ICL7 350 aa13□□□□□ -0.33
VAPA-204ENST00000577901 ZNF367Q7RTV3 350 aa13□□□□□ -0.33
VAPA-204ENST00000577901 LINC00596Q86U02 117 aa13□□□□□ -0.33
VAPA-204ENST00000577901 PNKDQ8N490 385 aa13□□□□□ -0.33
VAPA-204ENST00000577901 OR13D1Q8NGV5 346 aa13□□□□□ -0.33
VAPA-204ENST00000577901 OR5R1Q8NH85 324 aa13□□□□□ -0.33
VAPA-204ENST00000577901 PHYHIPQ92561 330 aa13□□□□□ -0.33
VAPA-204ENST00000577901 TMEM203Q969S6 136 aa13□□□□□ -0.33
VAPA-204ENST00000577901 MUL1Q969V5 352 aa13□□□□□ -0.33
VAPA-204ENST00000577901 FOXRED1Q96CU9 486 aaPredicted RBP13□□□□□ -0.33
VAPA-204ENST00000577901 UQCC2Q9BRT2 126 aa13□□□□□ -0.33
VAPA-204ENST00000577901 YTHDF1Q9BYJ9 559 aaKnown RBP13□□□□□ -0.33
VAPA-204ENST00000577901 BARHL1Q9BZE3 327 aa13□□□□□ -0.33
VAPA-204ENST00000577901 MRPS28Q9Y2Q9 187 aaKnown RBP13□□□□□ -0.33
VAPA-204ENST00000577901 MEX3AA1L020 520 aaKnown RBP12.99□□□□□ -0.33
VAPA-204ENST00000577901 SRMP19623 302 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 COX7A1P24310 79 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 LGALS4P56470 323 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 RBM11P57052 281 aaKnown RBP12.99□□□□□ -0.33
VAPA-204ENST00000577901 MPV17LQ2QL34 196 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 HSD17B12Q53GQ0 312 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 FBLN7Q53RD9 439 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 PAN3Q58A45 887 aaKnown RBP12.99□□□□□ -0.33
VAPA-204ENST00000577901 GLT8D1Q68CQ7 371 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 AWAT2Q6E213 333 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 HCP5Q6MZN7 132 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 GLIPR1L1Q6UWM5 242 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 ZNF782Q6ZMW2 699 aaPredicted RBP12.99□□□□□ -0.33
VAPA-204ENST00000577901 SVOPQ8N4V2 548 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 CORO2AQ92828 525 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 MRPS24Q96EL2 167 aaKnown RBP12.99□□□□□ -0.33
VAPA-204ENST00000577901 GAL3ST2Q9H3Q3 398 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 ACOT13Q9NPJ3 140 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 GHRLQ9UBU3 117 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 FBLN5Q9UBX5 448 aa12.99□□□□□ -0.33
VAPA-204ENST00000577901 TRAV24A0A0B4J272 114 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 ODAMA1E959 279 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 G3V4G9 280 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 HSPB6O14558 160 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 SC5DO75845 299 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 OR7C1O76099 320 aaPredicted RBP12.98□□□□□ -0.33
VAPA-204ENST00000577901 IGHV1-8P0DP01 117 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 GABRA5P31644 462 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 GLIPR1P48060 266 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 KCNJ3P48549 501 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 ATXN7L3Q14CW9 347 aaPredicted RBP12.98□□□□□ -0.33
VAPA-204ENST00000577901 BEAN1Q3B7T3 259 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 FAM27D1Q5T7N8 215 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 TCF23Q7RTU1 214 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 ZNF565Q8N9K5 539 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 IFT22Q9H7X7 185 aa12.98□□□□□ -0.33
VAPA-204ENST00000577901 ING3Q9NXR8 418 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms