RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 PRKXP51817 358 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 TDGF1P3P51864 188 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 RIDAP52758 137 aaKnown RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 DIO3P55073 304 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 FOXA1P55317 472 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 FAM3AP98173 230 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 DHODHQ02127 395 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 TLE4Q04727 773 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 TNFRSF9Q07011 255 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 GTF3C1Q12789 2109 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 RAB40BQ12829 278 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 MLLT11Q13015 90 aaPredicted RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 IL18R1Q13478 541 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 KRR1Q13601 381 aaKnown RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 SLC10A1Q14973 349 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 ARL6IP1Q15041 203 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 TAL2Q16559 108 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 DGUOKQ16854 277 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 DCST2Q5T1A1 773 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 CPTPQ5TA50 214 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 FHL5Q5TD97 284 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 MEDAGQ5VYS4 303 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 TRIQKQ629K1 86 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 FAHD2BQ6P2I3 314 aaPredicted RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 XKRXQ6PP77 449 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 FAM131AQ6UXB0 335 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 LYG2Q86SG7 212 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 RIMKLAQ8IXN7 391 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 C9orf40Q8IXQ3 194 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 PUSL1Q8N0Z8 303 aaKnown RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 SLC34A3Q8N130 599 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 MS4A15Q8N5U1 240 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 KLHDC1Q8N7A1 406 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 GVQW1Q8N7I0 195 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 OR2M7Q8NG81 312 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 OR10G8Q8NGN5 311 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 OR5M9Q8NGP3 310 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 OR52N1Q8NH53 320 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 SFXN5Q8TD22 340 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 GPR148Q8TDV2 347 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 CASTOR1Q8WTX7 329 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 PHLDA1Q8WV24 401 aaPredicted RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 RNF138Q8WVD3 245 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 GTF3AQ92664 365 aaKnown RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 BORCS5Q969J3 196 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 YIPF6Q96EC8 236 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 FAHD2AQ96GK7 314 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 RILPQ96NA2 401 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 HBEGFQ99075 208 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 SORT1Q99523 831 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 NAA50Q9GZZ1 169 aaKnown RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 IKZF5Q9H5V7 419 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 ZDHHC11Q9H8X9 412 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 SH2D2AQ9NP31 389 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 ABCB9Q9NP78 766 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 MYOZ1Q9NP98 299 aaPredicted RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 SDR39U1Q9NRG7 319 aaPredicted RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 ASF1BQ9NVP2 202 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 SDHAF2Q9NX18 166 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 THUMPD1Q9NXG2 353 aaKnown RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 SMPXQ9UHP9 88 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 BTNL2Q9UIR0 455 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 COPS3Q9UNS2 423 aa2.85□□□□□ -1.95
CDC27-213ENST00000571643 RCL1Q9Y2P8 373 aaKnown RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 PRRC2CQ9Y520 2896 aaKnown RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 HELZ2Q9BYK8 2649 aaKnown RBP2.85□□□□□ -1.95
CDC27-213ENST00000571643 ZGRF1Q86YA3 2104 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 RP1L1Q8IWN7 2480 aaPredicted RBP2.84□□□□□ -1.95
CDC27-213ENST00000571643 FASNP49327 2511 aaKnown RBP2.84□□□□□ -1.95
CDC27-213ENST00000571643 EXPH5Q8NEV8 1989 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 IGLV3-32A0A0A0MS00 114 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 A0A1W2PQD3 144 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 A0A1W2PRG6 482 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 M0QZK8 103 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 UPK1AO00322 258 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 EFNA2O43921 213 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 CDC40O60508 579 aaKnown RBP eCLIP2.84□□□□□ -1.95
CDC27-213ENST00000571643 SHOX2O60902 331 aaPredicted RBP2.84□□□□□ -1.95
CDC27-213ENST00000571643 MPDU1O75352 247 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 REM1O75628 298 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 TRAPPC6AO75865 159 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 DCTN3O75935 186 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 RAB36O95755 333 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 CLPSP04118 112 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 HPNP05981 417 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 MGMTP16455 207 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 AZU1P20160 251 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 PPIBP23284 216 aaKnown RBP2.84□□□□□ -1.95
CDC27-213ENST00000571643 LOXP28300 417 aaPredicted RBP2.84□□□□□ -1.95
CDC27-213ENST00000571643 CRABP1P29762 137 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 GNRHRP30968 328 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 S100A3P33764 101 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 SSTR5P35346 364 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 SOX3P41225 446 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 CA7P43166 264 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 PPOXP50336 477 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 ATP4BP51164 291 aa2.84□□□□□ -1.95
CDC27-213ENST00000571643 NCBP2P52298 156 aaKnown RBP eCLIP2.84□□□□□ -1.95
CDC27-213ENST00000571643 CRISP1P54107 249 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms