RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 VASH2Q86V25 355 aa9.47□□□□□ -0.89
CLK3-226ENST00000569406 MARCH1Q8TCQ1 289 aa9.47□□□□□ -0.89
CLK3-226ENST00000569406 ARHGDIGQ99819 225 aa9.47□□□□□ -0.89
CLK3-226ENST00000569406 OR52D1Q9H346 318 aa9.47□□□□□ -0.89
CLK3-226ENST00000569406 IGFLR1Q9H665 355 aa9.47□□□□□ -0.89
CLK3-226ENST00000569406 GEMIN7Q9H840 131 aaKnown RBP9.47□□□□□ -0.89
CLK3-226ENST00000569406 WDR87Q6ZQQ6 2873 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 GRIFINA4D1Z8 144 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 KLRC4-KLRK1H3BQV0 150 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 SLC31A1O15431 190 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 GAPDHP04406 335 aaKnown RBP9.46□□□□□ -0.89
CLK3-226ENST00000569406 ZNF735P0CB33 412 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 TMEM267Q0VDI3 215 aaPredicted RBP9.46□□□□□ -0.89
CLK3-226ENST00000569406 FOXF1Q12946 379 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 NSDHLQ15738 373 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 DEFB134Q4QY38 66 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 RCBTB1Q8NDN9 531 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 SNIP1Q8TAD8 396 aaKnown RBP9.46□□□□□ -0.89
CLK3-226ENST00000569406 TSEN15Q8WW01 171 aaKnown RBP9.46□□□□□ -0.89
CLK3-226ENST00000569406 DIO2Q92813 273 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 SLAMF6Q96DU3 332 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 PARLQ9H300 379 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 SMDT1Q9H4I9 107 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 PILRAQ9UKJ1 303 aa9.46□□□□□ -0.89
CLK3-226ENST00000569406 A0A087WV48 116 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 DIRC3C9JPN6 131 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 BRI3O95415 125 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 ARL3P36405 182 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 TNFRSF4P43489 277 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 GALR1P47211 349 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 FAM3BP58499 235 aaPredicted RBP9.46□□□□□ -0.9
CLK3-226ENST00000569406 ITPRIPL2Q3MIP1 535 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 CLEC18BQ6UXF7 455 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 DNM1P46Q6ZS02 220 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 MDGA2Q7Z553 956 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 TMEFF1Q8IYR6 380 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 OR52E2Q8NGJ4 325 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 OR2AE1Q8NHA4 323 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 OR2A5Q96R48 311 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 DERL1Q9BUN8 251 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 INPP5EQ9NRR6 644 aa9.46□□□□□ -0.9
CLK3-226ENST00000569406 FBLL1A6NHQ2 334 aaKnown RBP9.45□□□□□ -0.9
CLK3-226ENST00000569406 TRAPPC2LH3BP13 241 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 SIVA1O15304 175 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 HCRTR1O43613 425 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 ADRA2CP18825 462 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 ZNF776Q68DI1 518 aaPredicted RBP9.45□□□□□ -0.9
CLK3-226ENST00000569406 FCRL6Q6DN72 434 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 C16orf82Q7Z2V1 217 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 ATOH7Q8N100 152 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 ARHGEF39Q8N4T4 335 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 GUCD1Q96NT3 240 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 PHPT1Q9NRX4 125 aaPredicted RBP9.45□□□□□ -0.9
CLK3-226ENST00000569406 ETV2O00321 342 aaPredicted RBP9.45□□□□□ -0.9
CLK3-226ENST00000569406 CDS2O95674 445 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 DUSP1P28562 367 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 PLP1P60201 277 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 DMWDQ09019 674 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 PLPPR5Q32ZL2 321 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 FHL5Q5TD97 284 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 PTCRAQ6ISU1 281 aaPredicted RBP9.45□□□□□ -0.9
CLK3-226ENST00000569406 WDR82Q6UXN9 313 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 TMEM52Q8NDY8 209 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 PTPMT1Q8WUK0 201 aaPredicted RBP9.45□□□□□ -0.9
CLK3-226ENST00000569406 SLC35A4Q96G79 324 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 LIN37Q96GY3 246 aaPredicted RBP9.45□□□□□ -0.9
CLK3-226ENST00000569406 ABHD6Q9BV23 337 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 MMP17Q9ULZ9 603 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 IGHV1-69-2A0A0G2JMI3 117 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 PDE6DO43924 150 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 ICAM4Q14773 271 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 WDR74Q6RFH5 385 aaPredicted RBP9.45□□□□□ -0.9
CLK3-226ENST00000569406 PRSS41Q7RTY9 318 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 COMMD2Q86X83 199 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 SLC16A11Q8NCK7 471 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 OR5AU1Q8NGC0 362 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 C2orf50Q96LR7 162 aa9.45□□□□□ -0.9
CLK3-226ENST00000569406 EML5Q05BV3 1969 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 CDIPTO14735 213 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 YPEL1O60688 119 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 SRPXP78539 464 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 TMEM92Q6UXU6 159 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 ZNF788Q6ZQV5 615 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 GTF2H5Q6ZYL4 71 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 TMEM156Q8N614 296 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 GATSQ8NAP1 163 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 YPEL2Q96QA6 119 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 LRFN3Q9BTN0 628 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 WNT10AQ9GZT5 417 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 LPAR5Q9H1C0 372 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 MANBALQ9NQG1 85 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 AK3Q9UIJ7 227 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 MED31Q9Y3C7 131 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 TNFSF14O43557 240 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 LYPD3O95274 346 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 NUDT14O95848 222 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 NTSR1P30989 418 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 SHBQ15464 509 aa9.44□□□□□ -0.9
CLK3-226ENST00000569406 BSXQ3C1V8 233 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms