RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CTXN2P0C2S0 81 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 KIR2DS4P43632 304 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 FABP6P51161 128 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 KLF3P57682 345 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-221ENST00000567935 KIR2DS1Q14954 304 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 ALKBH6Q3KRA9 238 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 MEX3BQ6ZN04 569 aaKnown RBP12.38□□□□□ -0.43
COMMD4-221ENST00000567935 WDR86Q86TI4 376 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 MUC20Q8N307 709 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-221ENST00000567935 C12orf45Q8N5I9 185 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-221ENST00000567935 RELL2Q8NC24 303 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-221ENST00000567935 MRGPRFQ96AM1 343 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 OR2A7Q96R45 310 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 DECR2Q9NUI1 292 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 ZNF230Q9UIE0 474 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-221ENST00000567935 POU2F3Q9UKI9 436 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 MGAT4AQ9UM21 535 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 MEMO1Q9Y316 297 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 JMJD1CQ15652 2540 aa12.38□□□□□ -0.43
COMMD4-221ENST00000567935 IGLV3-9A0A075B6K5 115 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 A0A0B4J2A0 478 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 FABP7O15540 132 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 MLNRO43193 412 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 RGS11O94810 467 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 PTBP3O95758 552 aaKnown RBP12.37□□□□□ -0.43
COMMD4-221ENST00000567935 CXCL3P19876 107 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 AGAP20933 346 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 ZBTB25P24278 435 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 CD40P25942 277 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 CCKARP32238 428 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 CD200P41217 278 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 GLP1RP43220 463 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 DHRS2Q13268 280 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 ZNF146Q15072 292 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 TMEM128Q5BJH2 165 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 C11orf88Q6PI97 169 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 DHRS11Q6UWP2 260 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 MOB1BQ7L9L4 216 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 OR10Z1Q8NGY1 313 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 ZFAND1Q8TCF1 268 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 MARCH1Q8TCQ1 289 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 RADILQ96JH8 1075 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 HDHD3Q9BSH5 251 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-221ENST00000567935 HES4Q9HCC6 221 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 CHMP1AQ9HD42 196 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-221ENST00000567935 SHPKQ9UHJ6 478 aa12.37□□□□□ -0.43
COMMD4-221ENST00000567935 FN1P02751 2386 aaKnown RBP12.37□□□□□ -0.43
COMMD4-221ENST00000567935 ABCA4P78363 2273 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 PLSCR5A0PG75 271 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 F8VVB4 439 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 F8VWA3 439 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 SH2D1BO14796 132 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 DEGS1O15121 323 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 RHBDL1O75783 438 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 NXPH2O95156 264 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 DUS4LO95620 317 aaKnown RBP12.36□□□□□ -0.43
COMMD4-221ENST00000567935 HLA-AP01891 365 aaKnown RBP12.36□□□□□ -0.43
COMMD4-221ENST00000567935 OR5H8P0DN80 308 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 FOSL1P15407 271 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 HLA-GP17693 338 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 CD34P28906 385 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 CFHR2P36980 270 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 ASCL1P50553 236 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 SEC61A1P61619 476 aaKnown RBP12.36□□□□□ -0.43
COMMD4-221ENST00000567935 DHODHQ02127 395 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 LIN54Q6MZP7 749 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 SUMF2Q8NBJ7 301 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 NEK7Q8TDX7 302 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 MITD1Q8WV92 249 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 PHB2Q99623 299 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 SEBOXQ9HB31 216 aaPredicted RBP12.36□□□□□ -0.43
COMMD4-221ENST00000567935 Q9N2K0 584 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 RASL12Q9NYN1 266 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 C14orf166Q9Y224 244 aaKnown RBP12.36□□□□□ -0.43
COMMD4-221ENST00000567935 PRR14LQ5THK1 2151 aa12.36□□□□□ -0.43
COMMD4-221ENST00000567935 FBN1P35555 2871 aaKnown RBP12.35□□□□□ -0.43
COMMD4-221ENST00000567935 C9orf170A2RU37 121 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 FAM172BPA6NC97 362 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 VSTM5A8MXK1 200 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 CDIPTO14735 213 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 CTSDP07339 412 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-221ENST00000567935 GRPP07492 148 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 KCNJ3P48549 501 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 NPY4RP50391 375 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 NKX2-5P52952 324 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-221ENST00000567935 UCP3P55916 312 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 IL13RA1P78552 427 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 FBXL19-AS1Q494R0 122 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 AADACL3Q5VUY0 350 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 ZNF660Q6AZW8 331 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-221ENST00000567935 Q6P435 159 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 SLC22A25Q6T423 547 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 NCCRP1Q6ZVX7 275 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-221ENST00000567935 NLRC3Q7RTR2 1065 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 FAM90A1Q86YD7 464 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 OR52B4Q8NGK2 314 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 TMEM171Q8WVE6 324 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 CAPSLQ8WWF8 208 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 MAFIPQ8WZ33 124 aa12.35□□□□□ -0.43
COMMD4-221ENST00000567935 LRRC46Q96FV0 321 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms