RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 NKX6-3A6NJ46 265 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 SSX5O60225 188 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 NDUFS7O75251 213 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 CA11O75493 328 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 F12P00748 615 aaPredicted RBP9.26□□□□□ -0.93
SF3B3-205ENST00000564899 GYPAP02724 150 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 GLAP06280 429 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 GDNFP39905 211 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 BTG1P62324 171 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 COL10A1Q03692 680 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 RBM39Q14498 530 aaKnown RBP9.26□□□□□ -0.93
SF3B3-205ENST00000564899 CARTPTQ16568 116 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 DNM1P46Q6ZS02 220 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 BPIFB2Q8N4F0 458 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 ASCC1Q8N9N2 400 aaKnown RBP9.26□□□□□ -0.93
SF3B3-205ENST00000564899 ANGPTL6Q8NI99 470 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 GPX8Q8TED1 209 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 ZFAND2BQ8WV99 257 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 DYRK2Q92630 601 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 TRIM63Q969Q1 353 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 CMSS1Q9BQ75 279 aaKnown RBP9.26□□□□□ -0.93
SF3B3-205ENST00000564899 SEBOXQ9HB31 216 aaPredicted RBP9.26□□□□□ -0.93
SF3B3-205ENST00000564899 ETAA1Q9NY74 926 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 METRNQ9UJH8 293 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF222Q9UK12 451 aa9.26□□□□□ -0.93
SF3B3-205ENST00000564899 TMEM82A0PJX8 343 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 LANCL1O43813 399 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 PSPNO60542 156 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 RBBP9O75884 186 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 LMO1P25800 156 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 CBX5P45973 191 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 ACTBP60709 375 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 ACTG1P63261 375 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 IFITM3Q01628 133 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 KRTAP1-1Q07627 177 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 ZMYND11Q15326 602 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 KCNJ8Q15842 424 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 SHEQ5VZ18 495 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF57Q68EA5 555 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-205ENST00000564899 DCDC5Q6ZRR9 648 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 PEG10Q86TG7 708 aaKnown RBP9.25□□□□□ -0.93
SF3B3-205ENST00000564899 PPP1R35Q8TAP8 253 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 SDSLQ96GA7 329 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 TIMD4Q96H15 378 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 GAFA1Q96PS6 74 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 CCL13Q99616 98 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 HDHD3Q9BSH5 251 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-205ENST00000564899 CHST6Q9GZX3 395 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 PPA2Q9H2U2 334 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF665Q9H7R5 613 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 CHODLQ9H9P2 273 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 CHMP1AQ9HD42 196 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-205ENST00000564899 MYOZ1Q9NP98 299 aaPredicted RBP9.25□□□□□ -0.93
SF3B3-205ENST00000564899 C12orf4Q9NQ89 552 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 IFT46Q9NQC8 304 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 KLK11Q9UBX7 282 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 MTFP1Q9UDX5 166 aa9.25□□□□□ -0.93
SF3B3-205ENST00000564899 RBMX2Q9Y388 322 aaKnown RBP9.25□□□□□ -0.93
SF3B3-205ENST00000564899 CHD3Q12873 2000 aaKnown RBP9.24□□□□□ -0.93
SF3B3-205ENST00000564899 ISPDA4D126 451 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 PPIHO43447 177 aaKnown RBP9.24□□□□□ -0.93
SF3B3-205ENST00000564899 ORC5O43913 435 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF737O75373 536 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 IGHV2-70P01814 119 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 IGHV4-39P01824 125 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 FCER2P06734 321 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 AMY2BP19961 511 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 RCVRNP35243 200 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 MDH2P40926 338 aaKnown RBP9.24□□□□□ -0.93
SF3B3-205ENST00000564899 OR3A1P47881 315 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 KCNJ3P48549 501 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 SSBP1Q04837 148 aaKnown RBP9.24□□□□□ -0.93
SF3B3-205ENST00000564899 ATXN7L3Q14CW9 347 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-205ENST00000564899 AVPI1Q5T686 147 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 STEAP3Q658P3 488 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF788Q6ZQV5 615 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 C17orf107Q6ZR85 190 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 LYSMD2Q8IV50 215 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 TOMM5Q8N4H5 51 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF561Q8N587 486 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 OR4S1Q8NGB4 309 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 RAB1CQ92928 201 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 SNX22Q96L94 193 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 TMEM165Q9HC07 324 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 ZNF701Q9NV72 531 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-205ENST00000564899 BEX4Q9NWD9 120 aaPredicted RBP9.24□□□□□ -0.93
SF3B3-205ENST00000564899 ING3Q9NXR8 418 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 MAB21L2Q9Y586 359 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 USF3Q68DE3 2245 aa9.24□□□□□ -0.93
SF3B3-205ENST00000564899 LINC00854A0A1B0GVQ3 168 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 A0A1B0GW55 424 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 SIGLEC5O15389 551 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 TMPRSS2O15393 492 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 NDUFA2O43678 99 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 FSTL3O95633 263 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 FCGR3AP08637 254 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 CSF1P09603 554 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 GSTT2BP0CG30 244 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 DUX4L2P0CJ85 424 aa9.23□□□□□ -0.93
SF3B3-205ENST00000564899 DUX4L3P0CJ86 424 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms