RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 AKR1C4P17516 323 aa16.49■□□□□ 0.23
CLN6-205ENST00000564846 GLP1RP43220 463 aa16.49■□□□□ 0.23
CLN6-205ENST00000564846 PPP1R1AQ13522 171 aa16.49■□□□□ 0.23
CLN6-205ENST00000564846 TMEM128Q5BJH2 165 aa16.49■□□□□ 0.23
CLN6-205ENST00000564846 ZNF880Q6PDB4 577 aa16.49■□□□□ 0.23
CLN6-205ENST00000564846 GAPTQ8N292 157 aa16.49■□□□□ 0.23
CLN6-205ENST00000564846 C12orf45Q8N5I9 185 aaPredicted RBP16.49■□□□□ 0.23
CLN6-205ENST00000564846 ADAD2Q8NCV1 583 aaKnown RBP16.49■□□□□ 0.23
CLN6-205ENST00000564846 LINC01560Q8TB33 94 aa16.49■□□□□ 0.23
CLN6-205ENST00000564846 ITLN1Q8WWA0 313 aa16.49■□□□□ 0.23
CLN6-205ENST00000564846 ERGIC1Q969X5 290 aa16.49■□□□□ 0.23
CLN6-205ENST00000564846 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.48■□□□□ 0.23
CLN6-205ENST00000564846 C9orf170A2RU37 121 aa16.48■□□□□ 0.23
CLN6-205ENST00000564846 SHISA9B4DS77 424 aa16.48■□□□□ 0.23
CLN6-205ENST00000564846 FABP7O15540 132 aa16.48■□□□□ 0.23
CLN6-205ENST00000564846 CD3EP07766 207 aa16.48■□□□□ 0.23
CLN6-205ENST00000564846 NKX2-5P52952 324 aaPredicted RBP16.48■□□□□ 0.23
CLN6-205ENST00000564846 IL13RA1P78552 427 aa16.48■□□□□ 0.23
CLN6-205ENST00000564846 DHODHQ02127 395 aa16.48■□□□□ 0.23
CLN6-205ENST00000564846 MOB1BQ7L9L4 216 aa16.48■□□□□ 0.23
CLN6-205ENST00000564846 MOGAT3Q86VF5 341 aa16.48■□□□□ 0.23
CLN6-205ENST00000564846 RTBDNQ9BSG5 229 aaPredicted RBP16.48■□□□□ 0.23
CLN6-205ENST00000564846 MGAT4AQ9UM21 535 aa16.48■□□□□ 0.23
CLN6-205ENST00000564846 PGAM2P15259 253 aa16.47■□□□□ 0.23
CLN6-205ENST00000564846 FCGR2CP31995 323 aa16.47■□□□□ 0.23
CLN6-205ENST00000564846 CDSNQ15517 529 aa16.47■□□□□ 0.23
CLN6-205ENST00000564846 ZNF497Q6ZNH5 498 aa16.47■□□□□ 0.23
CLN6-205ENST00000564846 DMRTC2Q8IXT2 367 aaPredicted RBP16.47■□□□□ 0.23
CLN6-205ENST00000564846 UXS1Q8NBZ7 420 aa16.47■□□□□ 0.23
CLN6-205ENST00000564846 SEBOXQ9HB31 216 aaPredicted RBP16.47■□□□□ 0.23
CLN6-205ENST00000564846 C14orf166Q9Y224 244 aaKnown RBP16.47■□□□□ 0.23
CLN6-205ENST00000564846 RFPL4AA6NLU0 287 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 RFPL4AL1F8VTS6 287 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 GRNP28799 593 aaKnown RBP16.46■□□□□ 0.23
CLN6-205ENST00000564846 ERP29P30040 261 aaKnown RBP16.46■□□□□ 0.23
CLN6-205ENST00000564846 SERPINF1P36955 418 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 GZMKP49863 264 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 BAMBIQ13145 260 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 SNTB1Q13884 538 aaKnown RBP16.46■□□□□ 0.23
CLN6-205ENST00000564846 SPRNQ5BIV9 151 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 IGSF11Q5DX21 431 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 BEX5Q5H9J7 111 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 C20orf204Q6ZNR8 217 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 GCSAMQ8N6F7 178 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 GALNT11Q8NCW6 608 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 PLPPR1Q8TBJ4 325 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 ZFAND1Q8TCF1 268 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 MITD1Q8WV92 249 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 LIME1Q9H400 295 aa16.46■□□□□ 0.23
CLN6-205ENST00000564846 TUBAL3A6NHL2 446 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 C17orf100A8MU93 164 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 DUS4LO95620 317 aaKnown RBP16.46■□□□□ 0.22
CLN6-205ENST00000564846 LHBP01229 141 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 TK1P04183 234 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 CTSDP07339 412 aaPredicted RBP16.46■□□□□ 0.22
CLN6-205ENST00000564846 CD55P08174 381 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 SCTP09683 121 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 VAMP1P23763 118 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 CD34P28906 385 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 KCNJ3P48549 501 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 CEBPDP49716 269 aaPredicted RBP16.46■□□□□ 0.22
CLN6-205ENST00000564846 C4orf17Q53FE4 359 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 TMEM230Q96A57 120 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 DLL4Q9NR61 685 aa16.46■□□□□ 0.22
CLN6-205ENST00000564846 E7EQL1 145 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.45■□□□□ 0.22
CLN6-205ENST00000564846 PSPNO60542 156 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 OR2A4O95047 310 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 GIPP09681 153 aaPredicted RBP16.45■□□□□ 0.22
CLN6-205ENST00000564846 EGR1P18146 543 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 HLA-DRB3P79483 266 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 ATXN7L3Q14CW9 347 aaPredicted RBP16.45■□□□□ 0.22
CLN6-205ENST00000564846 NLRC3Q7RTR2 1065 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 OR4A4PQ8NGN8 299 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 Q8TCH9 128 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 MOB3AQ96BX8 217 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 OR2A7Q96R45 310 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 PHB2Q99623 299 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 TMPRSS13Q9BYE2 586 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 RANBP3Q9H6Z4 567 aaPredicted RBP16.45■□□□□ 0.22
CLN6-205ENST00000564846 GCM1Q9NP62 436 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 SLC23A1Q9UHI7 598 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 WIPI2Q9Y4P8 454 aa16.45■□□□□ 0.22
CLN6-205ENST00000564846 TPRP12270 2363 aaKnown RBP16.44■□□□□ 0.22
CLN6-205ENST00000564846 SMLR1H3BR10 107 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 M0R233 179 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 SLC22A5O76082 557 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 RCC1P18754 421 aaPredicted RBP16.44■□□□□ 0.22
CLN6-205ENST00000564846 TNFRSF1AP19438 455 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 PI3P19957 117 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 UCP3P55916 312 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 HOXA4Q00056 320 aaPredicted RBP16.44■□□□□ 0.22
CLN6-205ENST00000564846 TLE1Q04724 770 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 ASB13Q8WXK3 278 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 HYLS1Q96M11 299 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 CLEC4MQ9H2X3 399 aaPredicted RBP16.44■□□□□ 0.22
CLN6-205ENST00000564846 RNF7Q9UBF6 113 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 DNAJB11Q9UBS4 358 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 TRAPPC2LQ9UL33 140 aa16.44■□□□□ 0.22
CLN6-205ENST00000564846 RNF115Q9Y4L5 304 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms