RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 MYPOPQ86VE0 399 aaPredicted RBP4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 P2RY8Q86VZ1 359 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 SLC34A3Q8N130 599 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 TMEM178AQ8NBL3 297 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 OR51G1Q8NGK1 321 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 OR2A1Q8NGT9 310 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 OR10R2Q8NGX6 335 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 OR10X1Q8NGY0 326 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 C11orf52Q96A22 123 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 MRAP2Q96G30 205 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 PGLYRP4Q96LB8 373 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF354BQ96LW1 612 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 SMIM14Q96QK8 99 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 KIR2DL4Q99706 377 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 RNF126Q9BV68 326 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 B3GAT2Q9NPZ5 323 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 IMPAD1Q9NX62 359 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 VNN3Q9NY84 501 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 KCNIP1Q9NZI2 227 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 TMEM181Q9P2C4 612 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 SPRR3Q9UBC9 169 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 VPS29Q9UBQ0 182 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF780BQ9Y6R6 833 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 PRUNE2Q8WUY3 3088 aa4.15□□□□□ -1.75
VPS35P1-201ENST00000563400 KNTC1P50748 2209 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 TMEM131Q92545 1883 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 IGHV4OR15-8A0A075B7B6 117 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 UQCRHLA0A096LP55 91 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 TEX48A0A1B0GUV7 120 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 SMIM9A6NGZ8 99 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF726A6NNF4 738 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 BANF1O75531 89 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 NXPH4O95158 308 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 DHFRP00374 187 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 HPRT1P00492 218 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 LALBAP00709 142 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 CRYAAP02489 173 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 SERPINE1P05121 402 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 CD37P11049 281 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 IGFBP5P24593 272 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 GDF1P27539 372 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 MPIP34949 423 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 SSTR5P35346 364 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 OPRL1P41146 370 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 RPL29P47914 159 aaKnown RBP4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 VSX2P58304 361 aaPredicted RBP4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 LMO4P61968 165 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF266Q14584 549 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 HLA-DRB5Q30154 266 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 CEACAM21Q3KPI0 293 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 ATP6AP1LQ52LC2 224 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 MUC21Q5SSG8 566 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 OR2T5Q6IEZ7 315 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 SBSNQ6UWP8 590 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 FAM19A5Q7Z5A7 132 aaPredicted RBP4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 HOGA1Q86XE5 327 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 SPICQ8N5J4 248 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 OR5AP2Q8NGF4 316 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 OR52E2Q8NGJ4 325 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 OR2T29Q8NH02 315 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 PRSS3P2Q8NHM4 247 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 KCTD4Q8WVF5 259 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 RASSF5Q8WWW0 418 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 L3HYPDHQ96EM0 354 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 MAGEB18Q96M61 343 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 ZNF382Q96SR6 550 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 OR51B5Q9H339 312 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 PRORYQ9H606 182 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 RHOFQ9HBH0 211 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 LHX9Q9NQ69 397 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 SPANXB1Q9NS25 103 aaPredicted RBP4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 FAM206AQ9NX38 181 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 PSG11Q9UQ72 335 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 TP53TG1Q9Y2A0 90 aa4.14□□□□□ -1.75
VPS35P1-201ENST00000563400 RIF1Q5UIP0 2472 aaKnown RBP4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 PCNX2A6NKB5 2137 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 IGKV1D-13A0A0B4J2D9 117 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 IGHV5-51A0A0C4DH38 117 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 A0A0G2JRQ6 117 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 CENPVL3A0A0U1RRI6 287 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 B4DXG7 233 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 DISC1C4P0D8 188 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 TNFRSF11BO00300 401 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 UBDO15205 165 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 FABP7O15540 132 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 PLIN3O60664 434 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 CTNSO60931 367 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 SNAPINO95295 136 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 IGKV1-13P0DP09 117 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 ANOS1P23352 680 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 CERS1P27544 350 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 CCKARP32238 428 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 GCKP35557 465 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 SSR2P43308 183 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 GPR6P46095 362 aaPredicted RBP4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 EFNA3P52797 238 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 CRYBA4P53673 196 aa4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 FGF8P55075 233 aaPredicted RBP4.13□□□□□ -1.75
VPS35P1-201ENST00000563400 DLX1P56177 255 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms