RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SDK2Q58EX2 2172 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 LOC102723971A0A1B0GUV8 181 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 A8MXE2 369 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 PATE3B3GLJ2 98 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 CCL25O15444 150 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 GLI4P10075 376 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 GZMHP20718 246 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 ZNF93P35789 620 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 UCP3P55916 312 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 PLCXD2Q0VAA5 305 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 CHRFAM7AQ494W8 412 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 RTL6Q6ICC9 239 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 FBXW12Q6X9E4 464 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 ATG4DQ86TL0 474 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 FBXL14Q8N1E6 418 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 OR52N5Q8NH56 324 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 TP53RKQ96S44 253 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 AKIRIN1Q9H9L7 192 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 MSL2Q9HCI7 577 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 ST8SIA3O43173 380 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 MPZL1O95297 269 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 ISG15P05161 165 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 PFN1P07737 140 aaKnown RBP12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 DCAF7P61962 342 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 IL13RA2Q14627 380 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 MAJINQ3KP22 176 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 SP5Q6BEB4 398 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 OR5L2Q8NGL0 311 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 MS4A10Q96PG2 267 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 ALKBH3Q96Q83 286 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 CTDSP1Q9GZU7 261 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 WWTR1Q9GZV5 400 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 CHRNA10Q9GZZ6 450 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 B3GAT1Q9P2W7 334 aa12.19□□□□□ -0.46
GTF3C1-203ENST00000562609 FAM24AA6NFZ4 105 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 FRG2CA6NGY1 282 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 CRYM-AS1A6NIL9 109 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 ZFP92A6NM28 416 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 SRSF10O75494 262 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 BGLAPP02818 100 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 CFIP05156 583 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 CCL7P80098 99 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 FOXK1P85037 733 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 CDCP2Q5VXM1 449 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 MAML2Q8IZL2 1156 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 IL22RA1Q8N6P7 574 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 DAZLQ92904 295 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 ZNF2Q9BSG1 426 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 PCGF1Q9BSM1 259 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 COPS7AQ9UBW8 275 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 CD33P20138 364 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 GALNSP34059 522 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 SFTPDP35247 375 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 SELENOTP62341 195 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 RUNX1Q01196 453 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 TOMM20LQ6UXN7 152 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 C16orf82Q7Z2V1 217 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 CMTM1Q8IZ96 169 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 OR10G4Q8NGN3 311 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 FAM122AQ96E09 287 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 BOD1Q96IK1 185 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 PYGO2Q9BRQ0 406 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 TMEM59Q9BXS4 323 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 TBL1XR1Q9BZK7 514 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 PPIAL4AQ9Y536 164 aa12.18□□□□□ -0.46
GTF3C1-203ENST00000562609 TRBV11-1A0A0K0K1C0 115 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 ZNF878C9JN71 531 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 CSNK1A1P48729 337 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 MPV17LQ2QL34 196 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 HLA-BQ31612 363 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 ADPRHL1Q8NDY3 354 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 MRPS28Q9Y2Q9 187 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 NKX6-3A6NJ46 265 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 HBE1P02100 147 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 CTLA4P16410 223 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 EPHA8P29322 1005 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 GNMTQ14749 295 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 ADIRFQ15847 76 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 WDR74Q6RFH5 385 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 CLEC2AQ6UVW9 174 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 OR1L6Q8NGR2 347 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 LIPHQ8WWY8 451 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 C20orf144Q9BQM9 153 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 GPR35Q9HC97 309 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 FBLN5Q9UBX5 448 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 PAM16Q9Y3D7 125 aa12.17□□□□□ -0.46
GTF3C1-203ENST00000562609 AQP7O14520 342 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 TNFSF13O75888 250 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 PIGPP57054 158 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 HIST1H3AP68431 136 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 CPEB2Q7Z5Q1 589 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 TGIF2LYQ8IUE0 185 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 OR2C3Q8N628 320 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 TMEM171Q8WVE6 324 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 IL22RA2Q969J5 263 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 CCDC74BQ96LY2 380 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 ZNF701Q9NV72 531 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 LY6G6EA0A0G2JKS1 128 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 PRSS37A4D1T9 235 aa12.16□□□□□ -0.46
GTF3C1-203ENST00000562609 CTSDP07339 412 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms