RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 RIPPLY1Q0D2K3 151 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 KIAA0141Q14154 515 aaPredicted RBP3.29□□□□□ -1.88
LRRC28-222ENST00000561431 KIR2DS1Q14954 304 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 C3AR1Q16581 482 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 DEFB109BQ30KR1 87 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 TRMT5Q32P41 509 aaKnown RBP3.29□□□□□ -1.88
LRRC28-222ENST00000561431 CYBRD1Q53TN4 286 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 SPANXN3Q5MJ09 141 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 ACSM5Q6NUN0 579 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 ZNF774Q6NX45 483 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 Q6ZT83 130 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 FAM220AQ7Z4H9 259 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 FAM19A1Q7Z5A9 133 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 CMC1Q7Z7K0 106 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 THOC6Q86W42 341 aaKnown RBP3.29□□□□□ -1.88
LRRC28-222ENST00000561431 CPNE9Q8IYJ1 553 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 MDS2Q8NDY4 140 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 SFXN5Q8TD22 340 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 C11orf40Q8WZ69 217 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 OR5P2Q8WZ92 322 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 C12orf43Q96C57 262 aaKnown RBP3.29□□□□□ -1.88
LRRC28-222ENST00000561431 NTNG2Q96CW9 530 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 SDSLQ96GA7 329 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 FAM218AQ96MZ4 157 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 GPR21Q99679 349 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 CXXC4Q9H2H0 198 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 DSN1Q9H410 356 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 RETNQ9HD89 108 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 GLTPQ9NZD2 209 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 DHCR7Q9UBM7 475 aaKnown RBP3.29□□□□□ -1.88
LRRC28-222ENST00000561431 PRELID3BQ9Y3B1 194 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 FLNCQ14315 2725 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 UNC13CQ8NB66 2214 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 BAHCC1Q9P281 2608 aa3.29□□□□□ -1.88
LRRC28-222ENST00000561431 PIKFYVEQ9Y2I7 2098 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 IGKV3D-15A0A087WSY6 115 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 A0A1B0GX78 115 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 PQLC2LA1A4F0 135 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 FAM231BA6NCW3 169 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 OR6C6A6NF89 314 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 EFCAB9A8MZ26 197 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 SEC14L6B5MCN3 397 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 AZIN1O14977 448 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 PFDN6O15212 129 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 MPDU1O75352 247 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 SERPINB7O75635 380 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 PIAS1O75925 651 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 OR7A10O76100 309 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 WISP3O95389 354 aaPredicted RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 HAND1O96004 215 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 CATP04040 527 aaKnown RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 LIMS3P0CW19 117 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 LIMS4P0CW20 117 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 SMIM6P0DI80 62 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 C1GALT1C1LP0DN25 315 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 COX4I1P13073 169 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 ALOX5APP20292 161 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 GABRR1P24046 479 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 HTR1EP28566 365 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 IMPA1P29218 277 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 CEACAM6P40199 344 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 PMELP40967 661 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 RPL5P46777 297 aaKnown RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 EFNA3P52797 238 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 CLDN12P56749 244 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 VSX2P58304 361 aaPredicted RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 HILS1P60008 231 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 RAP1BP61224 184 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 TBPL1P62380 186 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 RPL31P62899 125 aaKnown RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 PRDX1Q06830 199 aaKnown RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 UNC119Q13432 240 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 GNMTQ14749 295 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 TBC1D28Q2M2D7 210 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 TTLL9Q3SXZ7 439 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 ZC2HC1BQ5TFG8 222 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 WDR25Q64LD2 544 aaPredicted RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 SBSNQ6UWP8 590 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 MBOAT2Q6ZWT7 520 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 FAM19A5Q7Z5A7 132 aaPredicted RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 NIT1Q86X76 327 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 SLC30A8Q8IWU4 369 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 DND1Q8IYX4 353 aaKnown RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 KIR3DL3Q8N743 410 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 C15orf54Q8N8G6 183 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 AQP11Q8NBQ7 271 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 OR2M7Q8NG81 312 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 OR52H1Q8NGJ2 320 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 OR5L2Q8NGL0 311 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 OR10G7Q8NGN6 311 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 CNIH3Q8TBE1 160 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 GPR148Q8TDV2 347 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 C16orf78Q8WTQ4 265 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 EEF1AKMT1Q8WVE0 214 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 SKA2Q8WVK7 121 aaPredicted RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.28□□□□□ -1.88
LRRC28-222ENST00000561431 RAB8BQ92930 207 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 ZHX1-C8orf76Q96EF9 292 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 C18orf12Q96KH6 178 aa3.28□□□□□ -1.88
LRRC28-222ENST00000561431 OR10C1Q96KK4 312 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms