RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 TRGV10A0A0A0MS01 117 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 MEX3AA1L020 520 aaKnown RBP10.69□□□□□ -0.7
SMAD3-213ENST00000560175 CLPSL1A2RUU4 121 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 HAX1O00165 279 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 CLPXO76031 633 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 IGLV1-47P01700 117 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 OMGP23515 440 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 COX7A1P24310 79 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 HSPA13P48723 471 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 LGALS4P56470 323 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 RBM11P57052 281 aaKnown RBP10.69□□□□□ -0.7
SMAD3-213ENST00000560175 SCN1BQ07699 218 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 TPBGQ13641 420 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 GPR176Q14439 515 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 LRRC75BQ2VPJ9 315 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 PIGYQ3MUY2 71 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 KRBOX4Q5JUW0 171 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 RSBN1Q5VWQ0 802 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-213ENST00000560175 OLFML2AQ68BL7 652 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 OR52W1Q6IF63 320 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 Q6ZSV7 163 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 LHFPL4Q7Z7J7 247 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 LINC00596Q86U02 117 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 RTN4RL2Q86UN3 420 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 OSR2Q8N2R0 312 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 OR10K1Q8NGX5 313 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 NKX3-1Q99801 234 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-213ENST00000560175 GAL3ST2Q9H3Q3 398 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 PCDHB16Q9NRJ7 776 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 OR6C3Q9NZP0 311 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 ST3GAL6Q9Y274 331 aa10.69□□□□□ -0.7
SMAD3-213ENST00000560175 CMYA5Q8N3K9 4069 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 IGHV2-26A0A0B4J1V2 119 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 PNMA8CA0A1B0GUJ8 204 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 A0A1W2PPK0 400 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 BTBD17A6NE02 478 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 ZNF729A6NN14 1252 aaPredicted RBP10.68□□□□□ -0.7
SMAD3-213ENST00000560175 NPIPB11E5RHQ5 1161 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 H3BUX3 64 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 HTR3BO95264 441 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 MAPK3P27361 379 aaPredicted RBP10.68□□□□□ -0.7
SMAD3-213ENST00000560175 PROK1P58294 105 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 MPV17LQ2QL34 196 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 ACSM3Q53FZ2 586 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 PRSS48Q7RTY5 328 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 FOXRED1Q96CU9 486 aaPredicted RBP10.68□□□□□ -0.7
SMAD3-213ENST00000560175 NR1H4Q96RI1 486 aaPredicted RBP10.68□□□□□ -0.7
SMAD3-213ENST00000560175 UQCC2Q9BRT2 126 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 CLEC7AQ9BXN2 247 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 BARHL1Q9BZE3 327 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 PPIL3Q9H2H8 161 aaKnown RBP10.68□□□□□ -0.7
SMAD3-213ENST00000560175 ZNF581Q9P0T4 197 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 RAB26Q9ULW5 256 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 ING4Q9UNL4 249 aa10.68□□□□□ -0.7
SMAD3-213ENST00000560175 KBTBD11-OT1A0A1B0GTJ5 212 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A22PA8MWA6 464 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 GEMIN2O14893 280 aaKnown RBP10.67□□□□□ -0.7
SMAD3-213ENST00000560175 ATP6V1G2O95670 118 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 CSTBP04080 98 aaKnown RBP10.67□□□□□ -0.7
SMAD3-213ENST00000560175 ARG1P05089 322 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 GTF2F2P13984 249 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 CDK2P24941 298 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 PAX6P26367 422 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 GDNFP39905 211 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 PAN3Q58A45 887 aaKnown RBP10.67□□□□□ -0.7
SMAD3-213ENST00000560175 RBM48Q5RL73 367 aaKnown RBP10.67□□□□□ -0.7
SMAD3-213ENST00000560175 SLC35E4Q6ICL7 350 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 IZUMO2Q6UXV1 221 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 LIAT1Q6ZQX7 453 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 GAPTQ8N292 157 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 NKAIN3Q8N8D7 197 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 ZNF565Q8N9K5 539 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 SUMF2Q8NBJ7 301 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 OR4D6Q8NGJ1 314 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 OR4P4Q8NGL7 312 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 PLPPR1Q8TBJ4 325 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 WFDC12Q8WWY7 111 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 PHYHIPQ92561 330 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 CITED1Q99966 193 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 FAM192AQ9GZU8 254 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 ZNF696Q9H7X3 374 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 RCC2Q9P258 522 aaKnown RBP10.67□□□□□ -0.7
SMAD3-213ENST00000560175 FBLN5Q9UBX5 448 aa10.67□□□□□ -0.7
SMAD3-213ENST00000560175 MGAM2Q2M2H8 2515 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 A0A1W2PP11 408 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A10PA6NDY2 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A18PA6NE21 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A16PA6NEW6 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A20PA6NIJ5 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A7PA6NKC0 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A12PA8MX19 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A5PA8MXJ8 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A23PA8MXZ1 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 LY6LH3BQJ8 138 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 RGS10O43665 173 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 UCHL1P09936 223 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A15PP0C7V4 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A13PP0C7W8 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A14PP0C7W9 464 aa10.66□□□□□ -0.7
SMAD3-213ENST00000560175 FAM90A24PP0C7X0 464 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms