RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 ZNF154Q13106 437 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 OR8B8Q15620 311 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 DEFB110Q30KQ9 67 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 KCNIP4Q6PIL6 250 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 Q6ZSR3 168 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 FAM57BQ71RH2 274 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 RD3Q7Z3Z2 195 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 NUFIP2Q7Z417 695 aaKnown RBP9.71□□□□□ -0.86
PCAT29-201ENST00000558411 SELENOHQ8IZQ5 122 aaKnown RBP9.71□□□□□ -0.86
PCAT29-201ENST00000558411 TMEM217Q8N7C4 229 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 ZNF321PQ8N8H1 164 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 SUMF1Q8NBK3 374 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 SIGLEC12Q96PQ1 595 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 ELL3Q9HB65 397 aaPredicted RBP9.71□□□□□ -0.86
PCAT29-201ENST00000558411 ZNF286AQ9HBT8 521 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 MSL2Q9HCI7 577 aa9.71□□□□□ -0.86
PCAT29-201ENST00000558411 PNRC2Q9NPJ4 139 aaKnown RBP9.71□□□□□ -0.86
PCAT29-201ENST00000558411 A0A1W2PPQ1 181 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 C17orf51A8MQB3 221 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 SLC31A1O15431 190 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 YPEL1O60688 119 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 TMEM50AO95807 157 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 IGKV3-11P04433 115 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 GLI4P10075 376 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 SELEP16581 610 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 RRADP55042 308 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 BIDP55957 195 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 SERF2P84101 59 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 OR5I1Q13606 314 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 TMEM183BQ1AE95 376 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 CXorf66Q5JRM2 361 aaPredicted RBP9.7□□□□□ -0.86
PCAT29-201ENST00000558411 NECAP1Q8NC96 275 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 C22orf15Q8WYQ4 148 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 TSACCQ96A04 125 aaPredicted RBP9.7□□□□□ -0.86
PCAT29-201ENST00000558411 DDIT4LQ96D03 193 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 YPEL2Q96QA6 119 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 AURKAIP1Q9NWT8 199 aaPredicted RBP9.7□□□□□ -0.86
PCAT29-201ENST00000558411 A0A0C4DFX4 3053 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 A0A0U1RQV5 110 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 SHISA7A6NL88 538 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 TNFRSF10CO14798 259 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 DHRS3O75911 302 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 SEMA4FO95754 770 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 CTSEP14091 401 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 EPHA8P29322 1005 aaPredicted RBP9.7□□□□□ -0.86
PCAT29-201ENST00000558411 OPRM1P35372 400 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 RBX1P62877 108 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 ZNF726P1Q15940 193 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 NMSQ5H8A3 153 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 SLC25A24Q6NUK1 477 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 LCN15Q6UWW0 184 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 SCGB1C1Q8TD33 95 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 PINX1Q96BK5 328 aaKnown RBP9.7□□□□□ -0.86
PCAT29-201ENST00000558411 MAGT1Q9H0U3 335 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 DNAJC4Q9NNZ3 241 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 TBX21Q9UL17 535 aa9.7□□□□□ -0.86
PCAT29-201ENST00000558411 UBE2J1Q9Y385 318 aaPredicted RBP9.7□□□□□ -0.86
PCAT29-201ENST00000558411 KIAA0100Q14667 2235 aaKnown RBP9.69□□□□□ -0.86
PCAT29-201ENST00000558411 ARID1BQ8NFD5 2236 aaPredicted RBP9.69□□□□□ -0.86
PCAT29-201ENST00000558411 TCRBV21S2A2A0A5A6 115 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 ADAM20O43506 726 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 TCF21O43680 179 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 AADACP22760 399 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 WASP42768 502 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 PAFAH1B2P68402 229 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 MEF2BQ02080 365 aaPredicted RBP9.69□□□□□ -0.86
PCAT29-201ENST00000558411 ENDOGQ14249 297 aaKnown RBP9.69□□□□□ -0.86
PCAT29-201ENST00000558411 C9orf50Q5SZB4 431 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 SSX7Q7RTT5 188 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 MRPL43Q8N983 215 aaKnown RBP9.69□□□□□ -0.86
PCAT29-201ENST00000558411 PLPPR1Q8TBJ4 325 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 ZNF721Q8TF20 911 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 ST8SIA1Q92185 356 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 VWCEQ96DN2 955 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 PGAM5Q96HS1 289 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 LYZL4Q96KX0 146 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 WFIKKN1Q96NZ8 548 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 GAL3ST4Q96RP7 486 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 RBKSQ9H477 322 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 PNO1Q9NRX1 252 aaKnown RBP9.69□□□□□ -0.86
PCAT29-201ENST00000558411 TMEM106BQ9NUM4 274 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 RNF115Q9Y4L5 304 aa9.69□□□□□ -0.86
PCAT29-201ENST00000558411 CHST1O43916 411 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 ZNF737O75373 536 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 VENTXO95231 258 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 TCN2P20062 427 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 VDAC1P21796 283 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 MDH2P40926 338 aaKnown RBP9.68□□□□□ -0.86
PCAT29-201ENST00000558411 CDKN1BP46527 198 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 RAB7AP51149 207 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 PAX9P55771 341 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 CLRN1P58418 232 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 RPL15P61313 204 aaKnown RBP9.68□□□□□ -0.86
PCAT29-201ENST00000558411 PPP1CAP62136 330 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 SELENOTP62341 195 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 PLCXD2Q0VAA5 305 aa9.68□□□□□ -0.86
PCAT29-201ENST00000558411 TRA2AQ13595 282 aaKnown RBP eCLIP9.68□□□□□ -0.86
PCAT29-201ENST00000558411 TMEM41BQ5BJD5 291 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms