RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 SLC17A1Q14916 467 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 ECSCRQ19T08 205 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 ZNF829Q3KNS6 432 aaPredicted RBP4.21□□□□□ -1.74
RTF1-204ENST00000558117 RFTN2Q52LD8 501 aaPredicted RBP4.21□□□□□ -1.74
RTF1-204ENST00000558117 TNFAIP8L3Q5GJ75 292 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 CCDC121Q6ZUS5 278 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 CROCCP2Q86T23 111 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 VRK2Q86Y07 508 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 ZNRF1Q8ND25 227 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 OR10A7Q8NGE5 316 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 OR1B1Q8NGR6 318 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 MAGEE2Q8TD90 523 aaPredicted RBP4.21□□□□□ -1.74
RTF1-204ENST00000558117 TCP10LQ8TDR4 215 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 DYDC1Q8WWB3 177 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 TSPAN32Q96QS1 320 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 ANKRD19PQ9H560 264 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 DCAF13Q9NV06 445 aaKnown RBP4.21□□□□□ -1.74
RTF1-204ENST00000558117 PRPF19Q9UMS4 504 aaKnown RBP4.21□□□□□ -1.74
RTF1-204ENST00000558117 ZNF256Q9Y2P7 627 aaPredicted RBP4.21□□□□□ -1.74
RTF1-204ENST00000558117 STARD10Q9Y365 291 aa4.21□□□□□ -1.74
RTF1-204ENST00000558117 TSSC4Q9Y5U2 329 aaPredicted RBP4.21□□□□□ -1.74
RTF1-204ENST00000558117 SORL1Q92673 2214 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 IGLV3-9A0A075B6K5 115 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 CEACAM18A8MTB9 384 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 SAP18O00422 153 aaKnown RBP4.2□□□□□ -1.74
RTF1-204ENST00000558117 GPR171O14626 319 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 TM9SF1O15321 606 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 TYROBPO43914 113 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 CA1P00915 261 aaPredicted RBP4.2□□□□□ -1.74
RTF1-204ENST00000558117 IGHG1P01857 330 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 APOA1P02647 267 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 C2P06681 752 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 FBP1P09467 338 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 PRB4P10163 310 aaPredicted RBP4.2□□□□□ -1.74
RTF1-204ENST00000558117 ZNF35P13682 527 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 BGNP21810 368 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 FASP25445 335 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 EIF1P41567 113 aaKnown RBP4.2□□□□□ -1.74
RTF1-204ENST00000558117 SERPINB8P50452 374 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 CCNG1P51959 295 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 AP1S2P56377 157 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 NAB1Q13506 487 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 UBE2V2Q15819 145 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 MRPL23Q16540 153 aaKnown RBP4.2□□□□□ -1.74
RTF1-204ENST00000558117 TP53I3Q53FA7 332 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 CYBRD1Q53TN4 286 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 MUC21Q5SSG8 566 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 FAM219BQ5XKK7 198 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 OR52E8Q6IFG1 317 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 ERICH5Q6P6B1 374 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 CASP12Q6UXS9 341 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 TMUB2Q71RG4 321 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 LRRC34Q8IZ02 419 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 FAM9CQ8IZT9 166 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 LINC00469Q8N7U9 141 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 ATP6V1C2Q8NEY4 427 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 OR6F1Q8NGZ6 308 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 RHEBL1Q8TAI7 183 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 EEF1AKMT1Q8WVE0 214 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 PCNPQ8WW12 178 aaKnown RBP4.2□□□□□ -1.74
RTF1-204ENST00000558117 ZNF317Q96PQ6 595 aaPredicted RBP4.2□□□□□ -1.74
RTF1-204ENST00000558117 GPR21Q99679 349 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 NABP2Q9BQ15 211 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 ZNF717Q9BY31 904 aaPredicted RBP4.2□□□□□ -1.74
RTF1-204ENST00000558117 SHCBP1LQ9BZQ2 653 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 TREM1Q9NP99 234 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 TMEM216Q9P0N5 145 aa4.2□□□□□ -1.74
RTF1-204ENST00000558117 EXOSC1Q9Y3B2 195 aaKnown RBP4.2□□□□□ -1.74
RTF1-204ENST00000558117 NUP214P35658 2090 aaPredicted RBP4.2□□□□□ -1.74
RTF1-204ENST00000558117 TCRBV4S1A1TA0A5B7 111 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 EI24O14681 340 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 CHST1O43916 411 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 HCKP08631 526 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 IMPDH1P20839 514 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 KITLGP21583 273 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 STOMP27105 288 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 CRABP2P29373 138 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 ALDH3A1P30838 453 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 ARR3P36575 388 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 RPL13AP40429 203 aaKnown RBP4.19□□□□□ -1.74
RTF1-204ENST00000558117 ID1P41134 155 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 RPS23P62266 143 aaKnown RBP4.19□□□□□ -1.74
RTF1-204ENST00000558117 AANATQ16613 207 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 SPRNQ5BIV9 151 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 KHDRBS2Q5VWX1 349 aaKnown RBP4.19□□□□□ -1.74
RTF1-204ENST00000558117 TIFABQ6ZNK6 161 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 ZCCHC23Q6ZST2 131 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 RPS27LQ71UM5 84 aaKnown RBP4.19□□□□□ -1.74
RTF1-204ENST00000558117 C10orf107Q8IVU9 208 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 FAM58AQ8N1B3 248 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 TYMSOSQ8TAI1 123 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 NDNFQ8TB73 568 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 CNIH3Q8TBE1 160 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 C10orf82Q8WW14 230 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 MYDGFQ969H8 173 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 ITFG2Q969R8 447 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 OR5M11Q96RB7 305 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 MBOAT4Q96T53 435 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 GPR22Q99680 433 aa4.19□□□□□ -1.74
RTF1-204ENST00000558117 PITX2Q99697 317 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms