RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 FABP7O15540 132 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 HLA-AP01891 365 aaKnown RBP10.52□□□□□ -0.73
SHMT2-233ENST00000557529 GSTT2P0CG29 244 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 PGAM2P15259 253 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 TNFRSF1AP19438 455 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 AGAP20933 346 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 ZBTB25P24278 435 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 DHRS2Q13268 280 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 TESK1Q15569 626 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 ZNF497Q6ZNH5 498 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 Q6ZPA2 131 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 C17orf107Q6ZR85 190 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 DMRTC2Q8IXT2 367 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-233ENST00000557529 GAPTQ8N292 157 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 C12orf45Q8N5I9 185 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-233ENST00000557529 DRAXINQ8NBI3 349 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-233ENST00000557529 OR2AK2Q8NG84 335 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 OR52B4Q8NGK2 314 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 OR11L1Q8NGX0 322 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 ZFAND1Q8TCF1 268 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 Q8TCH9 128 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 ZNF436Q9C0F3 470 aaPredicted RBP10.52□□□□□ -0.73
SHMT2-233ENST00000557529 DECR2Q9NUI1 292 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 C14orf166Q9Y224 244 aaKnown RBP10.52□□□□□ -0.73
SHMT2-233ENST00000557529 RNF115Q9Y4L5 304 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 NPTNQ9Y639 398 aa10.52□□□□□ -0.73
SHMT2-233ENST00000557529 TMEM30CPA0ZSE6 113 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 C17orf100A8MU93 164 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 E7EQL1 145 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 M0R233 179 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 LHBP01229 141 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 C1QBP02746 253 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 TK1P04183 234 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 CTSDP07339 412 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-233ENST00000557529 AKR1C4P17516 323 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 CXCL3P19876 107 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 APOBEC3AP31941 199 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-233ENST00000557529 FCGR2CP31995 323 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 HLA-DRB3P79483 266 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 DHODHQ02127 395 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 TLE1Q04724 770 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 PPP1R1AQ13522 171 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 EFNB3Q15768 340 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 TMEM128Q5BJH2 165 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 FAM209AQ5JX71 171 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 NOXA1Q86UR1 476 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 GCSAMQ8N6F7 178 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 OR4A4PQ8NGN8 299 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 ASB13Q8WXK3 278 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 EGLN1Q9GZT9 426 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 C5orf66Q9H5L9 145 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 RNF7Q9UBF6 113 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 DNAJB11Q9UBS4 358 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 WIPI2Q9Y4P8 454 aa10.51□□□□□ -0.73
SHMT2-233ENST00000557529 BSNQ9UPA5 3926 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 ZZEF1O43149 2961 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 C9orf170A2RU37 121 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 RFPL4AA6NLU0 287 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 B9A039 149 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 RFPL4AL1F8VTS6 287 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 DIRAS3O95661 229 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 GIPP09681 153 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-233ENST00000557529 ZNF728P0DKX0 622 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 EGR1P18146 543 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 GNLYP22749 145 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 GRNP28799 593 aaKnown RBP10.5□□□□□ -0.73
SHMT2-233ENST00000557529 CD34P28906 385 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 UCP3P55916 312 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 HERV-K104P61576 105 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 SEC61A1P61619 476 aaKnown RBP10.5□□□□□ -0.73
SHMT2-233ENST00000557529 IL13RA1P78552 427 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 TFF3Q07654 80 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 CDSNQ15517 529 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 SLC35E4Q6ICL7 350 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 C11orf88Q6PI97 169 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 ADAD2Q8NCV1 583 aaKnown RBP10.5□□□□□ -0.73
SHMT2-233ENST00000557529 PPP1R35Q8TAP8 253 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 PLPPR1Q8TBJ4 325 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 MITD1Q8WV92 249 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 MOB3AQ96BX8 217 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 RTBDNQ9BSG5 229 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-233ENST00000557529 CLEC4MQ9H2X3 399 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-233ENST00000557529 GCM1Q9NP62 436 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 TRAPPC2LQ9UL33 140 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 PCDHB10Q9UN67 800 aa10.5□□□□□ -0.73
SHMT2-233ENST00000557529 ACACBO00763 2458 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 ITPR1Q14643 2758 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 SPENQ96T58 3664 aaKnown RBP10.49□□□□□ -0.73
SHMT2-233ENST00000557529 LRRC30A6NM36 301 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-233ENST00000557529 PSPNO60542 156 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 CLDN14O95500 239 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 DUS4LO95620 317 aaKnown RBP10.49□□□□□ -0.73
SHMT2-233ENST00000557529 SCTP09683 121 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 PSG2P11465 335 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 IRF2P14316 349 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 VAMP1P23763 118 aa10.49□□□□□ -0.73
SHMT2-233ENST00000557529 ERP29P30040 261 aaKnown RBP10.49□□□□□ -0.73
SHMT2-233ENST00000557529 PRDX2P32119 198 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms