RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 ORM1P02763 201 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 CECR9P0C854 216 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 SLC2A1P11166 492 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 IMPA1P29218 277 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 GDI2P50395 445 aaKnown RBP2.08□□□□□ -2.08
SCFD1-221ENST00000556534 RPL14P50914 215 aaKnown RBP2.08□□□□□ -2.08
SCFD1-221ENST00000556534 PSMD7P51665 324 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 RAB8AP61006 207 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 ATP5G2Q06055 141 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 HSP90B2PQ58FF3 399 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 FAM162BQ5T6X4 162 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 MED27Q6P2C8 311 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 ZNF773Q6PK81 442 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 CLEC18BQ6UXF7 455 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 DGAT2L6Q6ZPD8 337 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 CLEC20AQ6ZU45 233 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 C10orf107Q8IVU9 208 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 BLIDQ8IZY5 108 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 ZDHHC22Q8N966 263 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 ZIC4Q8N9L1 334 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 GATD1Q8NB37 220 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 LFNGQ8NES3 379 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 OR2K2Q8NGT1 345 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 OR6K3Q8NGY3 331 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 OR1P1Q8NH06 330 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 KLF14Q8TD94 323 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-221ENST00000556534 DNAJB3Q8WWF6 145 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.08□□□□□ -2.08
SCFD1-221ENST00000556534 YIPF6Q96EC8 236 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 IP6K3Q96PC2 410 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 FAAP24Q9BTP7 215 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 ZNF426Q9BUY5 554 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 OR51E2Q9H255 320 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 PARVGQ9HBI0 331 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 TMEM38BQ9NVV0 291 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 RWDD2AQ9UIY3 292 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 PSMD13Q9UNM6 376 aa2.08□□□□□ -2.08
SCFD1-221ENST00000556534 RPRD2Q5VT52 1461 aaKnown RBP2.07□□□□□ -2.08
SCFD1-221ENST00000556534 RB1CC1Q8TDY2 1594 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 GOLGA6L10A6NI86 522 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 FAM183AA6NL82 134 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 NIPSNAP2O75323 286 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 CNMDO75829 334 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 EPPINO95925 133 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 SNRPAP09012 282 aaKnown RBP2.07□□□□□ -2.08
SCFD1-221ENST00000556534 PET100P0DJ07 73 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 SPNP16150 400 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 DLX6P56179 175 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 CLDN12P56749 244 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 FUT5Q11128 374 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 FAM45BPQ6NSW5 357 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 XKRXQ6PP77 449 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 FA2HQ7L5A8 372 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 MARCH3Q86UD3 253 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 PLCZ1Q86YW0 608 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 ATP6V1C2Q8NEY4 427 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 OR2M3Q8NG83 312 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 OR5L1Q8NGL2 311 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 OR5H2Q8NGV7 314 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 GPR22Q99680 433 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 NAGKQ9UJ70 344 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 CARHSP1Q9Y2V2 147 aaKnown RBP2.07□□□□□ -2.08
SCFD1-221ENST00000556534 ZNF780BQ9Y6R6 833 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 SDK2Q58EX2 2172 aa2.07□□□□□ -2.08
SCFD1-221ENST00000556534 HECW2Q9P2P5 1572 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 TRAV8-2A0A0B4J237 113 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 EFCAB9A8MZ26 197 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 C16orf90A8MZG2 172 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 FTCDNL1E5RQL4 147 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-221ENST00000556534 I3L4J1 428 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 K7EPK0 472 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 SLC37A4O43826 429 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 UGT2B11O75310 529 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 ENTPD6O75354 484 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 SOD3P08294 240 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 OR5AC1P0C628 307 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 PRTN3P24158 256 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 PSMB9P28065 219 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 COILP38432 576 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-221ENST00000556534 KRTAP12-3P60328 96 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 C1QTNF8P60827 252 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 DYNLL1P63167 89 aaKnown RBP2.06□□□□□ -2.08
SCFD1-221ENST00000556534 FLI1Q01543 452 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-221ENST00000556534 BTN1A1Q13410 526 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 ZNF235Q14590 738 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 TMEM241Q24JQ0 296 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 UBE2NLQ5JXB2 153 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 FAM104BQ5XKR9 115 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 PRSS54Q6PEW0 395 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 MUC15Q8N387 334 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 ITLN2Q8WWU7 325 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-221ENST00000556534 YPEL4Q96NS1 127 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 OLFM3Q96PB7 478 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 PRSS27Q9BQR3 290 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 DCUN1D5Q9BTE7 237 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 POTEKPQ9BYX7 375 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 TSGA10Q9BZW7 698 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 TAC3Q9UHF0 121 aa2.06□□□□□ -2.08
SCFD1-221ENST00000556534 TBL2Q9Y4P3 447 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms