RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 MPZP25189 248 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 LMO1P25800 156 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 S100A7P31151 101 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 PAX5Q02548 391 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 DMRTA1Q5VZB9 504 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 GAPTQ8N292 157 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 TMEM256Q8N2U0 113 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 FAM131CQ96AQ9 280 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 HS3ST6Q96QI5 342 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 FAM103A1Q9BTL3 118 aaKnown RBP7.7□□□□□ -1.18
SYNE2-217ENST00000555022 RBKSQ9H477 322 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 CCL28Q9NRJ3 127 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 SLC7A10Q9NS82 523 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 NECAP2Q9NVZ3 263 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 TUBD1Q9UJT1 453 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 ST3GAL6Q9Y274 331 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 DOCK10Q96BY6 2186 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 LRRC3CA6NJW4 275 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 CLDN34H7C241 214 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 IL18BPO95998 194 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 FBLP22087 321 aaKnown RBP7.7□□□□□ -1.18
SYNE2-217ENST00000555022 NPBWR2P48146 333 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF41P51814 821 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-217ENST00000555022 NUTF2P61970 127 aaKnown RBP7.7□□□□□ -1.18
SYNE2-217ENST00000555022 TRA2AQ13595 282 aaKnown RBP eCLIP7.7□□□□□ -1.18
SYNE2-217ENST00000555022 SLC10A1Q14973 349 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 VASH2Q86V25 355 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 D2HGDHQ8N465 521 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 OR1P1Q8NH06 330 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 CLDND2Q8NHS1 167 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 MALSU1Q96EH3 234 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 LRRC61Q9BV99 259 aa7.7□□□□□ -1.18
SYNE2-217ENST00000555022 ICE1Q9Y2F5 2266 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 CACNA1EQ15878 2313 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 IGKV1-27A0A075B6S5 117 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 TRBV11-1A0A0K0K1C0 115 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 NPIPB7O75200 414 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 SCTP09683 121 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 SPANXN5Q5MJ07 72 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 ETFRF1Q6IPR1 90 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 TCEAL6Q6IPX3 200 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 TOMM20LQ6UXN7 152 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF488Q96MN9 340 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF385AQ96PM9 386 aaKnown RBP7.69□□□□□ -1.18
SYNE2-217ENST00000555022 PATZ1Q9HBE1 687 aaKnown RBP7.69□□□□□ -1.18
SYNE2-217ENST00000555022 B3GAT1Q9P2W7 334 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 IGKV1D-13A0A0B4J2D9 117 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 A0A0G2JRQ6 117 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 C3orf85A0A1B0GTC6 90 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 UBE2L5PA0A1B0GUS4 154 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 HSPB2A8KAH6 182 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 TCF21O43680 179 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 CELA2AP08217 269 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 IGKV1-13P0DP09 117 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 SELEP16581 610 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 BTF3P20290 206 aaKnown RBP7.69□□□□□ -1.18
SYNE2-217ENST00000555022 HSPB2Q16082 182 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF774Q6NX45 483 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 DOK3Q7L591 496 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 ZDHHC23Q8IYP9 409 aa7.69□□□□□ -1.18
SYNE2-217ENST00000555022 ALKBH3Q96Q83 286 aaPredicted RBP7.69□□□□□ -1.18
SYNE2-217ENST00000555022 H7BYZ3 331 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 NUPR1O60356 82 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 TSPAN2O60636 221 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 CEACAM1P13688 526 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 DCAF7P61962 342 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 SLC25A26Q70HW3 274 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 NOXO1Q8NFA2 376 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 OR4F5Q8NH21 305 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 OR1L3Q8NH93 324 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 LYPD6BQ8NI32 183 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 MSI2Q96DH6 328 aaKnown RBP7.68□□□□□ -1.18
SYNE2-217ENST00000555022 BORCS8Q96FH0 119 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 OR4F4Q96R69 305 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 IMMP2LQ96T52 175 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 NDUFAF3Q9BU61 184 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 SEMA5BQ9P283 1151 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 C2orf16Q68DN1 1984 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 FER1L5A0AVI2 2057 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 IGKV1-12A0A0C4DH73 117 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 LIPT2A6NK58 231 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 PPP5D1E7EU14 171 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 M0R135 149 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 GDF9O60383 454 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 CA11O75493 328 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 IGKV1D-12P01611 117 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 B4GALT1P15291 398 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 GALR1P47211 349 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF266Q14584 549 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 RNF151Q2KHN1 245 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 ASPHD1Q5U4P2 390 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 ARHGEF39Q8N4T4 335 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 OR10A7Q8NGE5 316 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 OR13D1Q8NGV5 346 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 M1APQ8TC57 530 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 SCGB1C1Q8TD33 95 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 TMEM234Q8WY98 164 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 ZNF799Q96GE5 643 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 DIRC2Q96SL1 478 aa7.68□□□□□ -1.18
SYNE2-217ENST00000555022 KIAA1456Q9P272 454 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms